Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 Y_RNA.682-201ENST00000516457 100 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXA11P31270 ELOCP31-201ENST00000540463 467 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 TRAV37-201ENST00000553906 342 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 RPL23AP84-201ENST00000571193 464 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 MIR4672-201ENST00000583126 81 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 AC124303.1-201ENST00000605703 360 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 AL138726.1-201ENST00000614873 333 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 FAM157A-202ENST00000615155 405 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 AC090971.5-201ENST00000621102 293 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 AL589994.2-201ENST00000621124 579 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXA11P31270 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXA11P31270 AL365361.1-201ENST00000566942 3481 ntBASIC3.14□□□□□ -1.91
HOXA11P31270 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
HOXA11P31270 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXA11P31270 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXA11P31270 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA11P31270 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXA11P31270 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXA11P31270 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA11P31270 SNORD116-11-201ENST00000383882 92 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 RNU6-474P-201ENST00000384243 107 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 RNU6-198P-201ENST00000384258 104 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 RNU6-434P-201ENST00000384376 107 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA11P31270 RPLP0P7-201ENST00000416050 667 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXA11P31270 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA11P31270 RPS24P13-201ENST00000442520 397 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 NEFMP1-201ENST00000443423 1006 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC108938.1-201ENST00000451204 136 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC107399.1-201ENST00000451226 265 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 UBE2DNL-203ENST00000474922 222 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 HSPE1P6-201ENST00000479457 291 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC104136.1-201ENST00000512969 394 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA11P31270 RNU2-69P-201ENST00000516061 100 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 SNORA14.1-201ENST00000516113 141 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 SNORA31.21-201ENST00000517180 77 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA11P31270 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.13□□□□□ -1.91
HOXA11P31270 AP005639.2-201ENST00000527592 928 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA11P31270 AL121821.2-201ENST00000556081 394 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXA11P31270 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXA11P31270 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA11P31270 AC006023.1-201ENST00000603944 259 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 CYP2C61P-201ENST00000604072 290 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 ATP1B3P1-201ENST00000605365 821 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA11P31270 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA11P31270 AC002064.3-201ENST00000623448 346 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AC073308.1-201ENST00000623696 305 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA11P31270 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA11P31270 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA11P31270 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HOXA11P31270 HSPA8P4-201ENST00000511877 1920 ntBASIC3.13□□□□□ -1.91
HOXA11P31270 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA11P31270 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HOXA11P31270 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HOXA11P31270 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA11P31270 RNU1-105P-201ENST00000363470 161 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 SNORA4.3-201ENST00000365564 137 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 RNU6-393P-201ENST00000384475 107 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 RNU6-738P-201ENST00000384531 106 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 SNORD70.1-201ENST00000391007 85 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 RNA5SP354-201ENST00000391247 136 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 MIR548F5-201ENST00000408421 86 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 AC245054.2-201ENST00000415639 319 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXA11P31270 HMGN2P30-201ENST00000423237 256 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 RPL32P28-201ENST00000443577 397 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 NIPA2P5-201ENST00000452282 464 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXA11P31270 RNU6-927P-201ENST00000516199 100 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 RNU6-677P-201ENST00000516914 101 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXA11P31270 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXA11P31270 COPS8P3-201ENST00000526024 482 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXA11P31270 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXA11P31270 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
HOXA11P31270 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXA11P31270 AC007151.1-201ENST00000572774 483 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 AC138761.3-201ENST00000579993 334 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 MIR3171-201ENST00000584270 74 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA11P31270 AL080274.1-201ENST00000605565 220 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 AL133215.3-201ENST00000609801 448 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 AL359757.2-201ENST00000624309 274 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.12□□□□□ -1.91
HOXA11P31270 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA11P31270 ZNF519P1-201ENST00000449011 1626 ntBASIC3.11□□□□□ -1.91
HOXA11P31270 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
HOXA11P31270 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA11P31270 AC008669.1-201ENST00000565823 2178 ntBASIC3.11□□□□□ -1.91
HOXA11P31270 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms