Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNA5SP28-201ENST00000363841 119 ntBASIC4.84□□□□□ -1.63
VARSP26640 RNU6-1180P-201ENST00000364935 107 ntBASIC4.84□□□□□ -1.63
VARSP26640 RNU6-147P-201ENST00000383983 107 ntBASIC4.84□□□□□ -1.63
VARSP26640 SNORA66-201ENST00000384792 133 ntBASIC4.84□□□□□ -1.63
VARSP26640 U3.40-201ENST00000408706 208 ntBASIC4.84□□□□□ -1.63
VARSP26640 RN7SKP61-201ENST00000410642 295 ntBASIC4.84□□□□□ -1.63
VARSP26640 RNA5SP146-201ENST00000410743 123 ntBASIC4.84□□□□□ -1.63
VARSP26640 COX6B1P1-201ENST00000415962 213 ntBASIC4.84□□□□□ -1.63
VARSP26640 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VARSP26640 AC096649.2-201ENST00000416186 393 ntBASIC4.84□□□□□ -1.63
VARSP26640 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.84□□□□□ -1.63
VARSP26640 RPS29P9-201ENST00000440360 171 ntBASIC4.84□□□□□ -1.63
VARSP26640 AL450023.3-201ENST00000440592 271 ntBASIC4.84□□□□□ -1.63
VARSP26640 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.84□□□□□ -1.63
VARSP26640 AC010285.1-201ENST00000470580 392 ntBASIC4.84□□□□□ -1.63
VARSP26640 UQCRHP4-201ENST00000471686 272 ntBASIC4.84□□□□□ -1.63
VARSP26640 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.84□□□□□ -1.63
VARSP26640 RNU5E-3P-201ENST00000515913 68 ntBASIC4.84□□□□□ -1.63
VARSP26640 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VARSP26640 AC090049.2-201ENST00000550377 109 ntBASIC4.84□□□□□ -1.63
VARSP26640 AL391813.1-201ENST00000603098 260 ntBASIC4.84□□□□□ -1.63
VARSP26640 U7.2-201ENST00000607576 63 ntBASIC4.84□□□□□ -1.63
VARSP26640 MIR8069-1-201ENST00000616627 86 ntBASIC4.84□□□□□ -1.63
VARSP26640 AL591926.8-201ENST00000616876 211 ntBASIC4.84□□□□□ -1.63
VARSP26640 MIR8069-2-201ENST00000621412 86 ntBASIC4.84□□□□□ -1.63
VARSP26640 MIR7641-1-201ENST00000627518 61 ntBASIC4.84□□□□□ -1.63
VARSP26640 MIR6844-201ENST00000637122 62 ntBASIC4.84□□□□□ -1.63
VARSP26640 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.84□□□□□ -1.63
VARSP26640 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VARSP26640 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VARSP26640 NOL8P1-201ENST00000508336 3529 ntBASIC4.84□□□□□ -1.63
VARSP26640 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VARSP26640 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
VARSP26640 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
VARSP26640 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.84□□□□□ -1.64
VARSP26640 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VARSP26640 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VARSP26640 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VARSP26640 AC010329.5-201ENST00000623497 2174 ntBASIC4.83□□□□□ -1.64
VARSP26640 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VARSP26640 RPL26P27-201ENST00000414397 437 ntBASIC4.83□□□□□ -1.64
VARSP26640 AL135790.2-201ENST00000437701 267 ntBASIC4.83□□□□□ -1.64
VARSP26640 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.83□□□□□ -1.64
VARSP26640 AL354714.3-201ENST00000447284 493 ntBASIC4.83□□□□□ -1.64
VARSP26640 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.83□□□□□ -1.64
VARSP26640 ENPP7P9-201ENST00000514456 627 ntBASIC4.83□□□□□ -1.64
VARSP26640 RNU1-103P-201ENST00000516502 125 ntBASIC4.83□□□□□ -1.64
VARSP26640 RNA5SP43-201ENST00000516559 110 ntBASIC4.83□□□□□ -1.64
VARSP26640 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.83□□□□□ -1.64
VARSP26640 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
VARSP26640 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VARSP26640 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VARSP26640 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VARSP26640 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VARSP26640 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
VARSP26640 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.82□□□□□ -1.64
VARSP26640 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VARSP26640 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
VARSP26640 AL133243.3-201ENST00000617415 3004 ntBASIC4.82□□□□□ -1.64
VARSP26640 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VARSP26640 RNA5SP123-201ENST00000363244 119 ntBASIC4.82□□□□□ -1.64
VARSP26640 Y_RNA.287-201ENST00000364853 94 ntBASIC4.82□□□□□ -1.64
VARSP26640 Y_RNA.309-201ENST00000365046 111 ntBASIC4.82□□□□□ -1.64
VARSP26640 RNU6-140P-201ENST00000384566 108 ntBASIC4.82□□□□□ -1.64
VARSP26640 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VARSP26640 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.82□□□□□ -1.64
VARSP26640 AC244098.2-201ENST00000422068 99 ntBASIC4.82□□□□□ -1.64
VARSP26640 AC012306.1-201ENST00000423267 114 ntBASIC4.82□□□□□ -1.64
VARSP26640 AC078809.1-201ENST00000427601 140 ntBASIC4.82□□□□□ -1.64
VARSP26640 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.82□□□□□ -1.64
VARSP26640 AC245047.8-201ENST00000456455 284 ntBASIC4.82□□□□□ -1.64
VARSP26640 RN7SL244P-201ENST00000493405 297 ntBASIC4.82□□□□□ -1.64
VARSP26640 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.82□□□□□ -1.64
VARSP26640 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.82□□□□□ -1.64
VARSP26640 RNA5SP249-201ENST00000516127 99 ntBASIC4.82□□□□□ -1.64
VARSP26640 RNU6-589P-201ENST00000516485 107 ntBASIC4.82□□□□□ -1.64
VARSP26640 RNU2-12P-201ENST00000517216 168 ntBASIC4.82□□□□□ -1.64
VARSP26640 AP004242.1-201ENST00000533701 349 ntBASIC4.82□□□□□ -1.64
VARSP26640 AC005868.1-201ENST00000536421 331 ntBASIC4.82□□□□□ -1.64
VARSP26640 MIR4691-201ENST00000583764 85 ntBASIC4.82□□□□□ -1.64
VARSP26640 IPO5P1-202ENST00000600039 287 ntBASIC4.82□□□□□ -1.64
VARSP26640 AC087783.2-201ENST00000605070 562 ntBASIC4.82□□□□□ -1.64
VARSP26640 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.82□□□□□ -1.64
VARSP26640 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.82□□□□□ -1.64
VARSP26640 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VARSP26640 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.82□□□□□ -1.64
VARSP26640 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VARSP26640 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VARSP26640 ZNF702P-202ENST00000434269 1966 ntBASIC4.82□□□□□ -1.64
VARSP26640 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VARSP26640 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.81□□□□□ -1.64
VARSP26640 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.81□□□□□ -1.64
VARSP26640 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VARSP26640 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VARSP26640 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VARSP26640 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.81□□□□□ -1.64
VARSP26640 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VARSP26640 AC092268.1-201ENST00000342691 405 ntBASIC4.81□□□□□ -1.64
VARSP26640 RN7SKP104-201ENST00000362605 328 ntBASIC4.81□□□□□ -1.64
VARSP26640 RNU6-1048P-201ENST00000364054 107 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms