Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MIR15A-201ENST00000607334 83 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 AL359547.2-201ENST00000615810 418 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 GABRG2-229ENST00000641017 3628 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 AC092593.1-201ENST00000515413 1815 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC6P09630 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 OR4G2P-202ENST00000641004 1759 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC6P09630 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
HOXC6P09630 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC6P09630 RNU5A-1-201ENST00000362698 116 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 RNU1-35P-201ENST00000362782 153 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 Y_RNA.431-201ENST00000384086 102 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 RNU6-43P-201ENST00000384302 107 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 BTF3L4P3-201ENST00000418879 476 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AL160275.3-201ENST00000423876 471 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC6P09630 AL513124.1-201ENST00000450410 614 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC6P09630 HMGN2P16-201ENST00000456802 261 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 RPL7P5-201ENST00000471472 736 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AC117503.1-201ENST00000472241 394 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AC012181.1-201ENST00000479895 423 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AC027575.1-201ENST00000481064 460 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AC108860.1-201ENST00000484521 383 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC6P09630 HMGB3P15-201ENST00000507326 574 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.1□□□□□ -1.91
HOXC6P09630 SNORA25.17-201ENST00000517184 124 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 RNA5SP454-201ENST00000517231 127 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC6P09630 COPS8P3-201ENST00000526024 482 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AP005639.2-201ENST00000527592 928 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC6P09630 SYF2P1-201ENST00000550658 413 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AC090115.3-201ENST00000553218 849 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AL355836.1-201ENST00000555951 870 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AC020661.2-201ENST00000560114 134 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC6P09630 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC6P09630 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC6P09630 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC6P09630 AC174048.1-201ENST00000603389 144 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 AP001330.4-201ENST00000604350 154 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 U2.17-201ENST00000611454 95 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HOXC6P09630 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.1□□□□□ -1.91
HOXC6P09630 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC6P09630 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
HOXC6P09630 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC6P09630 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC6P09630 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC6P09630 Y_RNA.212-201ENST00000364177 102 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 Y_RNA.216-201ENST00000364205 93 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 RNU6-371P-201ENST00000364283 108 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 RNU6-1303P-201ENST00000364841 107 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 SNORA4.3-201ENST00000365564 137 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 SNORD116-11-201ENST00000383882 92 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 RNU6-474P-201ENST00000384243 107 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXC6P09630 AC074085.1-201ENST00000413598 418 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC6P09630 BRK1P2-201ENST00000442875 223 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 AC107399.1-201ENST00000451226 265 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC6P09630 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC6P09630 snoU13.4-201ENST00000458916 104 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC6P09630 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC6P09630 MTCO1P29-201ENST00000496868 288 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 MTND5P5-201ENST00000503764 376 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 AC005741.1-201ENST00000511094 432 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 RNA5SP24-201ENST00000516478 95 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 RNA5SP471-201ENST00000516971 106 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 SNRPGP16-201ENST00000533275 226 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 APOOP3-201ENST00000536787 586 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC6P09630 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC6P09630 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC6P09630 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC6P09630 SNORD84-203ENST00000584275 78 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 MIR5692C1-201ENST00000585309 91 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 AC012119.1-201ENST00000603184 222 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 AL133215.3-201ENST00000609801 448 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 Y_RNA.812-201ENST00000610788 101 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 Y_RNA.784-201ENST00000613803 101 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 Y_RNA.787-201ENST00000616522 101 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 Y_RNA.780-201ENST00000617336 101 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC6P09630 Y_RNA.801-201ENST00000619005 101 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 AL360181.4-201ENST00000621752 134 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC6P09630 AC064859.1-201ENST00000624741 174 ntBASIC3.09□□□□□ -1.91
HOXC6P09630 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC6P09630 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HOXC6P09630 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC6P09630 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HOXC6P09630 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HOXC6P09630 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
HOXC6P09630 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms