Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.85□□□□□ -2.27
HMGB3O15347 AL355472.4-201ENST00000610233 626 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGB3O15347 AC112204.3-201ENST00000623822 332 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 PCMTD1P7-201ENST00000634506 357 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.85□□□□□ -2.27
HMGB3O15347 MIR301A-201ENST00000385261 86 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 RN7SKP61-201ENST00000410642 295 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 UBE2V1P10-201ENST00000414685 269 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGB3O15347 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGB3O15347 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.84□□□□□ -2.27
HMGB3O15347 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGB3O15347 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.84□□□□□ -2.27
HMGB3O15347 RPL23AP76-201ENST00000441860 458 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 AC003071.1-201ENST00000451219 789 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 AL353752.1-201ENST00000454946 260 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 HMGN1P13-201ENST00000505795 138 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 RNU6-991P-201ENST00000516168 107 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 AC084364.2-201ENST00000546924 395 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 CR383656.8-201ENST00000549046 145 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGB3O15347 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGB3O15347 MTATP6P25-201ENST00000574491 261 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.84□□□□□ -2.27
HMGB3O15347 AL590240.4-201ENST00000616908 390 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.84□□□□□ -2.27
HMGB3O15347 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
HMGB3O15347 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.28
HMGB3O15347 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.28
HMGB3O15347 DDX43P2-201ENST00000604753 1354 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RNU6-942P-201ENST00000363002 107 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RNU6-289P-201ENST00000364093 107 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 Y_RNA.534-201ENST00000384599 112 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RNU6-360P-201ENST00000390944 104 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RNU2-23P-201ENST00000410545 195 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RPS12P24-201ENST00000412619 387 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AC016831.2-201ENST00000417179 352 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 EIF1P1-201ENST00000421436 341 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AL589872.1-201ENST00000426602 288 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.83□□□□□ -2.28
HMGB3O15347 CBX3P6-201ENST00000430257 527 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AL591704.1-201ENST00000432574 275 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.83□□□□□ -2.28
HMGB3O15347 AL606517.1-201ENST00000446914 387 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 OR2AQ1P-201ENST00000451972 200 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
HMGB3O15347 RNU6-333P-201ENST00000459117 107 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RPL36AP21-201ENST00000490372 323 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.83□□□□□ -2.28
HMGB3O15347 RNU1-41P-201ENST00000516161 162 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RNU7-40P-201ENST00000516397 64 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RNU1-48P-201ENST00000516400 162 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGB3O15347 CENPUP1-201ENST00000526649 1202 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 DEFB130C-202ENST00000530001 230 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGB3O15347 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGB3O15347 AC137800.2-201ENST00000574375 120 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 NIFKP6-201ENST00000598115 845 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 RPL21P136-201ENST00000605378 396 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AC012676.2-201ENST00000619258 186 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AC123767.1-202ENST00000620407 817 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AC130454.1-201ENST00000622948 401 ntBASIC0.83□□□□□ -2.28
HMGB3O15347 AC233981.2-201ENST00000611524 1614 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
HMGB3O15347 RNU1-22P-201ENST00000363334 158 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 RNU1-124P-201ENST00000363861 145 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 RNU6-26P-201ENST00000383985 107 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 MIR1289-2-201ENST00000408360 111 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGB3O15347 OOSP1P1-201ENST00000423265 274 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGB3O15347 MTND4P25-201ENST00000441039 533 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 GDI2P2-201ENST00000445131 608 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.82□□□□□ -2.28
HMGB3O15347 AC130509.1-201ENST00000464158 433 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HMGB3O15347 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HMGB3O15347 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGB3O15347 AC025678.1-201ENST00000567861 338 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 MIR4421-201ENST00000578133 69 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HMGB3O15347 SNORD114-21-201ENST00000606412 72 ntBASIC0.82□□□□□ -2.28
HMGB3O15347 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGB3O15347 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
HMGB3O15347 RNU6-853P-201ENST00000364306 107 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 RNU6-701P-201ENST00000384059 107 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 RNU6-1222P-201ENST00000384615 107 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.81□□□□□ -2.28
HMGB3O15347 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGB3O15347 AL953862.1-201ENST00000423016 168 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 AC245047.4-201ENST00000433189 144 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 RSL24D1P8-201ENST00000434442 492 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 SNRPEP7-201ENST00000438350 220 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 NEFMP1-201ENST00000443423 1006 ntBASIC0.81□□□□□ -2.28
HMGB3O15347 AC087343.1-201ENST00000477341 475 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms