Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC188H7C350 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC188H7C350 SNORA5B-201ENST00000363786 132 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AC068050.1-201ENST00000394891 380 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 U6atac.2-201ENST00000408644 118 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 RNU2-29P-201ENST00000410423 189 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 RNU2-63P-201ENST00000410792 194 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AC105272.1-201ENST00000438604 198 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 TPT1P7-201ENST00000458300 517 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 RPL23AP45-201ENST00000476406 468 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC188H7C350 HMGB1P29-201ENST00000505659 499 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AC092436.1-201ENST00000506450 503 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC188H7C350 AC107222.1-201ENST00000510899 637 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 RNU5B-3P-201ENST00000516601 115 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC188H7C350 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC188H7C350 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AP005136.1-201ENST00000579765 429 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC188H7C350 HMGB1P24-202ENST00000615653 685 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AC009509.4-201ENST00000619202 509 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 AL031601.2-202ENST00000622650 282 ntBASIC2.52□□□□□ -2.01
CCDC188H7C350 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC188H7C350 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.51□□□□□ -2.01
CCDC188H7C350 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC188H7C350 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CCDC188H7C350 RNU1-51P-201ENST00000365345 176 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC188H7C350 RNU6-517P-201ENST00000384362 110 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 RNU6-434P-201ENST00000384376 107 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 RNU6-393P-201ENST00000384475 107 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 Y_RNA.559-201ENST00000384686 107 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 RNU6-1072P-201ENST00000384703 107 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 RNU6-443P-201ENST00000384780 107 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC188H7C350 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC188H7C350 NUP35P1-201ENST00000422734 947 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC188H7C350 AC107083.1-201ENST00000439643 279 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 PRPS1P1-201ENST00000445305 876 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AL118520.1-201ENST00000450770 291 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC188H7C350 AC080013.2-201ENST00000460866 323 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AC108078.1-201ENST00000508073 725 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC188H7C350 AC105417.1-201ENST00000514691 285 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AP001893.2-201ENST00000526949 202 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.51□□□□□ -2.01
CCDC188H7C350 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC188H7C350 AC027176.1-201ENST00000560204 514 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AC008752.3-201ENST00000588113 712 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AC073410.2-201ENST00000603240 332 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AC116312.1-201ENST00000606841 314 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AC016717.2-201ENST00000609089 5141 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
CCDC188H7C350 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC188H7C350 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC188H7C350 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CCDC188H7C350 RNU6-212P-201ENST00000362642 104 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 RNU6-527P-201ENST00000363425 104 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 Y_RNA.159-201ENST00000363674 87 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 RNA5SP125-201ENST00000364843 120 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 RNU6-996P-201ENST00000365438 107 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 Y_RNA.381-201ENST00000365666 102 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 SNORD70.1-201ENST00000391007 85 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 RNU6-1140P-201ENST00000410517 106 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC188H7C350 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC188H7C350 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC188H7C350 AL356010.1-201ENST00000456364 102 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 SCARNA18-201ENST00000459004 134 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 GMFBP1-201ENST00000467831 427 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC188H7C350 AC018437.1-201ENST00000492214 406 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC188H7C350 LRRC34P2-201ENST00000514850 553 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AC009063.1-201ENST00000563342 702 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC188H7C350 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC188H7C350 MTATP6P3-201ENST00000581686 676 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 MIR4672-201ENST00000583126 81 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC188H7C350 AL670379.2-201ENST00000604983 252 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 Z82243.1-201ENST00000609432 473 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC188H7C350 RMST_4.1-201ENST00000616886 107 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AL354950.2-201ENST00000617939 290 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AC244517.12-201ENST00000623581 663 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC188H7C350 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC188H7C350 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC188H7C350 AC006020.1-201ENST00000420179 1854 ntBASIC2.5□□□□□ -2.01
CCDC188H7C350 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC188H7C350 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC188H7C350 RNU6-552P-201ENST00000362869 119 ntBASIC2.49□□□□□ -2.01
CCDC188H7C350 SNORD56.1-201ENST00000362913 68 ntBASIC2.49□□□□□ -2.01
CCDC188H7C350 RNU6-1303P-201ENST00000364841 107 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms