Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP17L3A6NCW0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP17L3A6NCW0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 SNORA31-201ENST00000362607 130 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 Y_RNA.83-201ENST00000363005 113 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 Y_RNA.150-201ENST00000363562 102 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 RNU6-884P-201ENST00000363889 107 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 SNORD32A-201ENST00000364805 84 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 RNU1-100P-201ENST00000365255 165 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 RNA5SP167-201ENST00000365461 116 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 SNORA29-201ENST00000384183 140 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 RNU6-318P-201ENST00000384283 103 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 MIR7-3-201ENST00000384898 110 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 RNA5SP129-201ENST00000410276 118 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 NDUFS5P4-201ENST00000412983 318 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 RPL23AP95-201ENST00000426806 265 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 AC091874.1-201ENST00000511402 339 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 AC037487.3-201ENST00000606668 112 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 AC092435.4-201ENST00000623012 4159 ntBASIC4.89□□□□□ -1.63
USP17L3A6NCW0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L3A6NCW0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 RNU1-15P-201ENST00000353977 144 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 SNORD56.1-201ENST00000362913 68 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 RNU1-140P-201ENST00000365040 165 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 Y_RNA.793-201ENST00000411222 111 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 AC005002.2-201ENST00000438228 269 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 HSPE1P25-201ENST00000455484 251 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 AC097462.2-201ENST00000504623 481 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 IGLV3-26-201ENST00000520756 302 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 AC100770.1-201ENST00000532310 322 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 SNORD113-5-201ENST00000607261 78 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP17L3A6NCW0 Z82217.1-201ENST00000625157 8149 ntBASIC4.88□□□□□ -1.63
USP17L3A6NCW0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 Y_RNA.319-201ENST00000365138 92 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 SNORD12B-201ENST00000410433 91 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 AC096638.1-201ENST00000444678 216 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 PRSS3P4-201ENST00000453323 162 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 RPL21P104-201ENST00000464143 478 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 RPL7P49-201ENST00000471402 708 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 SEPT14P8-201ENST00000508026 178 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 CR383656.8-201ENST00000549046 145 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 BRDTP1-201ENST00000605735 677 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 AC127459.3-201ENST00000624328 466 ntBASIC4.87□□□□□ -1.63
USP17L3A6NCW0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP17L3A6NCW0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 AC090740.1-201ENST00000623193 2262 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 RNU6-858P-201ENST00000362436 107 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 U8.11-201ENST00000384699 133 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 U8.12-201ENST00000384701 133 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 AC074117.2-201ENST00000417130 397 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 SSXP4-201ENST00000451349 245 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 U8.18-201ENST00000459285 133 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 RNU7-143P-201ENST00000516781 65 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 RNU6-789P-201ENST00000517105 102 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 RNA5SP179-201ENST00000517284 121 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 AC026403.1-201ENST00000518938 295 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 AP004242.1-201ENST00000533701 349 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.86□□□□□ -1.63
USP17L3A6NCW0 AC091167.4-201ENST00000605079 184 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.86□□□□□ -1.63
USP17L3A6NCW0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms