Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNU1-104P-201ENST00000517280 175 ntBASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 IGKV1-22-201ENST00000524313 326 ntBASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 AP003730.1-201ENST00000524605 285 ntBASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 MRPS21P7-201ENST00000566937 238 ntBASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 RNU6-94P-201ENST00000607728 107 ntBASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 OR4F13P-202ENST00000560066 2054 ntBASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA4Q9Y5G9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 ZNF137P-201ENST00000456718 1920 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 Y_RNA.49-201ENST00000362714 112 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 MIR550A3-201ENST00000390735 95 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 RNA5SP504-201ENST00000410676 117 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 OR2AH1P-201ENST00000425717 928 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 AL772161.1-201ENST00000439130 476 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 AL021397.1-201ENST00000451806 248 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 RN7SL860P-201ENST00000473738 223 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 RN7SL708P-201ENST00000580952 299 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 TCL6_2.1-201ENST00000615162 119 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 AC005562.2-201ENST00000618264 111 ntBASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDHGA4Q9Y5G9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AL645733.1-201ENST00000402250 217 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AL009179.1-201ENST00000406085 265 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AC004866.1-201ENST00000411748 78 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 MTATP6P21-201ENST00000440681 189 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 RPS21P4-201ENST00000487122 248 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AC108022.1-201ENST00000493466 478 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AC107918.3-201ENST00000533272 382 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AC122688.1-201ENST00000541494 223 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AC015720.1-201ENST00000565251 277 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 MTND6P33-201ENST00000571794 183 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AP000769.2-201ENST00000602344 396 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 MIR6133-201ENST00000617057 108 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 AC018692.3-201ENST00000623929 123 ntBASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA4Q9Y5G9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PCDHGA4Q9Y5G9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.34□□□□□ -1.56
PCDHGA4Q9Y5G9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.34□□□□□ -1.56
PCDHGA4Q9Y5G9 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 U8.4-201ENST00000363626 134 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 Y_RNA.323-201ENST00000365157 109 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU6-622P-201ENST00000384272 103 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 MIR325-201ENST00000385260 98 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU1-77P-201ENST00000390868 162 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AC007161.1-204ENST00000423039 460 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 RNU6-437P-201ENST00000459408 95 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AC010285.1-201ENST00000470580 392 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AIG1P1-201ENST00000503376 148 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 RNA5SP153-201ENST00000516498 76 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 IGKV2D-19-201ENST00000523346 262 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AL138880.2-201ENST00000616214 239 ntBASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA4Q9Y5G9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHGA4Q9Y5G9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms