Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 HMGB1P37-201ENST00000439613 609 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 RPS27AP10-201ENST00000496103 208 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 RN7SL558P-201ENST00000497468 299 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 RN7SKP46-201ENST00000515942 234 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-709P-201ENST00000517257 104 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC083809.1-201ENST00000615051 472 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AL022401.1-201ENST00000619498 108 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 MIR3529-201ENST00000637713 78 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 AL136964.1-201ENST00000622038 2990 ntBASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB11Q9Y5F2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 DHX9P1-201ENST00000436565 3076 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 ADAM3A-203ENST00000461344 2157 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 EIF4HP2-201ENST00000424380 563 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 AC091179.3-201ENST00000474761 144 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 MIR3684-201ENST00000579779 74 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 AL356575.1-201ENST00000603008 283 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 AL591034.3-201ENST00000605511 685 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 MIR7703-201ENST00000620784 77 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB11Q9Y5F2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 MIR569-201ENST00000385228 96 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 AC016831.4-201ENST00000438302 307 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 RPL39P29-201ENST00000447779 157 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 AC010409.1-201ENST00000487382 476 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 AC078918.1-201ENST00000498515 228 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 AC133555.2-201ENST00000550213 292 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 MTND6P33-201ENST00000571794 183 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 AC022726.1-201ENST00000587475 207 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 FAM27B-201ENST00000610601 213 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 MIR6853-201ENST00000619642 74 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 MFSD8-216ENST00000641147 4009 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 NOL8P1-201ENST00000508336 3529 ntBASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB11Q9Y5F2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 TLK1P1-201ENST00000456760 2440 ntBASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-799P-201ENST00000363567 107 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-151P-201ENST00000364158 107 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-275P-201ENST00000364910 107 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 RNU6-487P-201ENST00000365430 104 ntBASIC4.65□□□□□ -1.67
PCDHB11Q9Y5F2 RNA5SP390-201ENST00000410191 113 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms