Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC026726.1-201ENST00000512859 601 ntBASIC4.33□□□□□ -1.72
DDX41Q9UJV9 CBX3P8-201ENST00000532412 525 ntBASIC4.33□□□□□ -1.72
DDX41Q9UJV9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.33□□□□□ -1.72
DDX41Q9UJV9 MIR5187-201ENST00000583479 76 ntBASIC4.33□□□□□ -1.72
DDX41Q9UJV9 AL451007.1-201ENST00000595491 289 ntBASIC4.33□□□□□ -1.72
DDX41Q9UJV9 AC007485.1-201ENST00000616755 206 ntBASIC4.33□□□□□ -1.72
DDX41Q9UJV9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.33□□□□□ -1.72
DDX41Q9UJV9 AC092628.2-201ENST00000622492 339 ntBASIC4.33□□□□□ -1.72
DDX41Q9UJV9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.33□□□□□ -1.72
DDX41Q9UJV9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.33□□□□□ -1.72
DDX41Q9UJV9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DDX41Q9UJV9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DDX41Q9UJV9 ADAM3A-203ENST00000461344 2157 ntBASIC4.33□□□□□ -1.72
DDX41Q9UJV9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.33□□□□□ -1.72
DDX41Q9UJV9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 Y_RNA.48-201ENST00000362710 103 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 BTF3L4P2-201ENST00000392798 346 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 NUP35P1-201ENST00000422734 947 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 MTCYBP10-201ENST00000424905 650 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 YME1L1P1-201ENST00000429435 297 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AL160004.2-201ENST00000432935 350 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AL353997.1-201ENST00000432936 108 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 snoU13.28-201ENST00000459235 104 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 RNU6-120P-201ENST00000516077 103 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 SNORA31.18-201ENST00000517043 134 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AC022695.1-201ENST00000522089 237 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 GNAI2P1-201ENST00000541815 315 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AL391261.3-201ENST00000557194 520 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AC020895.1-201ENST00000595362 272 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AC092447.9-201ENST00000603395 144 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AC136443.5-201ENST00000603741 370 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 RNVU1-4-201ENST00000612985 164 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AL138880.2-201ENST00000616214 239 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AC090617.7-201ENST00000623952 126 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AC138627.2-201ENST00000624202 601 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 MIR3199-2-201ENST00000636243 86 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AC009093.8-201ENST00000641769 292 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 AC110491.1-201ENST00000562191 2010 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 ZNF299P-201ENST00000406845 1804 ntBASIC4.32□□□□□ -1.72
DDX41Q9UJV9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DDX41Q9UJV9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.31□□□□□ -1.72
DDX41Q9UJV9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DDX41Q9UJV9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.31□□□□□ -1.72
DDX41Q9UJV9 Y_RNA.39-201ENST00000362620 98 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 Y_RNA.80-201ENST00000362996 102 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 RNU6-105P-201ENST00000363909 104 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 Y_RNA.314-201ENST00000365114 102 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 MIR7-3-201ENST00000384898 110 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 MIR184-201ENST00000384962 84 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 AL035423.1-201ENST00000420331 213 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.31□□□□□ -1.72
DDX41Q9UJV9 AC012308.1-201ENST00000451232 178 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 AC010265.1-201ENST00000513509 211 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 RNA5SP164-201ENST00000516533 110 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 RNU7-4P-201ENST00000516961 62 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 Y_RNA.720-201ENST00000517166 92 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.31□□□□□ -1.72
DDX41Q9UJV9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.31□□□□□ -1.72
DDX41Q9UJV9 7SK.7-201ENST00000603504 247 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 RNU1-30P-201ENST00000606575 163 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 AC069200.1-201ENST00000609511 323 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 AC068831.7-201ENST00000616954 363 ntBASIC4.31□□□□□ -1.72
DDX41Q9UJV9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DDX41Q9UJV9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.31□□□□□ -1.72
DDX41Q9UJV9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 MAPK10-373ENST00000641983 6772 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 RNU6-858P-201ENST00000362436 107 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 SNORA63.1-201ENST00000362493 131 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 SNORD6-201ENST00000365444 73 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AP000567.1-201ENST00000406413 156 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 BPY2DP-201ENST00000422208 265 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 RPS29P31-201ENST00000446147 164 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 HMGN2P10-201ENST00000448085 265 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 GSTA11P-201ENST00000452866 669 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 MTND5P22-201ENST00000458380 195 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AC116655.1-201ENST00000508324 901 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 IGKV2-23-201ENST00000518729 323 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 MIR3186-201ENST00000577404 85 ntBASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.3□□□□□ -1.72
DDX41Q9UJV9 HMGB1P24-202ENST00000615653 685 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms