Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 ZNF192P1-203ENST00000565888 810 ntBASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 MIR4744-201ENST00000581563 82 ntBASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 AL110115.1-201ENST00000614396 364 ntBASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 AL022401.1-201ENST00000619498 108 ntBASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.74□□□□□ -1.65
CUEDC1Q9NWM3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 SNORA72.2-201ENST00000365028 127 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 Y_RNA.337-201ENST00000365312 102 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 RNU6-578P-201ENST00000390980 103 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 AC007738.1-201ENST00000413892 348 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 RPL17P36-201ENST00000420302 549 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 RPL7AP25-201ENST00000423357 805 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 RPS15AP5-201ENST00000436276 388 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 RPL35AP21-201ENST00000437667 333 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 AC112498.1-201ENST00000444401 332 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 AL121594.1-201ENST00000475906 575 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 KC877373.1-201ENST00000479066 408 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 AC073073.1-201ENST00000493920 463 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 FCF1P8-201ENST00000510322 597 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 RNA5SP73-201ENST00000516744 108 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 AC005868.1-201ENST00000536421 331 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 AC011603.4-201ENST00000611325 277 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 uc_338.32-201ENST00000615087 172 ntBASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CUEDC1Q9NWM3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 SNORD115-8-201ENST00000363856 82 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 SNORD115-38-201ENST00000365037 82 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 AL591034.1-201ENST00000407447 340 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 AL078601.1-201ENST00000444542 271 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 EEF1B2P7-201ENST00000451177 676 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 RPL23AP56-201ENST00000460778 453 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 RPL30P5-201ENST00000494923 336 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 RN7SKP122-201ENST00000515923 296 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 RPL23AP53-201ENST00000521854 457 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 AL590392.1-201ENST00000604960 446 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 AF127577.6-201ENST00000623352 2191 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 OR56B2P-202ENST00000641377 2453 ntBASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
CUEDC1Q9NWM3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CUEDC1Q9NWM3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CUEDC1Q9NWM3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 CUL1P1-201ENST00000509510 2425 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 AC068538.1-201ENST00000376856 336 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 RNU6-142P-201ENST00000384019 107 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 U8.10-201ENST00000384260 133 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 MIR3074-201ENST00000384885 81 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 MIR325-201ENST00000385260 98 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 Y_RNA.595-201ENST00000410403 105 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 Z85995.1-201ENST00000415547 335 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 RPL18P10-201ENST00000425606 538 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 Z82210.1-201ENST00000440037 231 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 RNU7-197P-201ENST00000458836 62 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 AC139453.3-201ENST00000493276 369 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 RNU6-58P-201ENST00000517143 103 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 TRAV28-201ENST00000557548 323 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 MIR6129-201ENST00000616087 109 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 MIR3658-201ENST00000636291 56 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 AC241585.2-209ENST00000638217 143 ntBASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.71□□□□□ -1.66
CUEDC1Q9NWM3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CUEDC1Q9NWM3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms