Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC008885.1-201ENST00000514930 301 ntBASIC2.96□□□□□ -1.94
PKP4Q99569 Y_RNA.682-201ENST00000516457 100 ntBASIC2.96□□□□□ -1.94
PKP4Q99569 Y_RNA.689-201ENST00000516589 107 ntBASIC2.96□□□□□ -1.94
PKP4Q99569 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.96□□□□□ -1.94
PKP4Q99569 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.96□□□□□ -1.94
PKP4Q99569 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.96□□□□□ -1.94
PKP4Q99569 AC012493.2-201ENST00000595083 291 ntBASIC2.96□□□□□ -1.94
PKP4Q99569 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.96□□□□□ -1.94
PKP4Q99569 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.96□□□□□ -1.94
PKP4Q99569 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.96□□□□□ -1.94
PKP4Q99569 AL133215.3-201ENST00000609801 448 ntBASIC2.96□□□□□ -1.94
PKP4Q99569 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.96□□□□□ -1.94
PKP4Q99569 PART1_1.1-201ENST00000611761 217 ntBASIC2.96□□□□□ -1.94
PKP4Q99569 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.96□□□□□ -1.94
PKP4Q99569 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
PKP4Q99569 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
PKP4Q99569 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PKP4Q99569 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PKP4Q99569 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PKP4Q99569 AC073325.2-201ENST00000339545 159 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 Y_RNA.259-201ENST00000364619 101 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 Y_RNA.326-201ENST00000365176 113 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 Y_RNA.339-201ENST00000365325 102 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PKP4Q99569 SNORD21-201ENST00000383953 95 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 Y_RNA.399-201ENST00000383955 105 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 RNU6-1297P-201ENST00000384415 104 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 RNU6-14P-201ENST00000384630 106 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 MIR767-201ENST00000390228 109 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PKP4Q99569 RNA5SP219-201ENST00000390940 113 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 RNU6-817P-201ENST00000391083 104 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 RPL21P3-201ENST00000395517 478 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 RN7SKP220-201ENST00000410611 288 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.95□□□□□ -1.94
PKP4Q99569 VN1R36P-201ENST00000414936 291 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 MTCO2P27-201ENST00000420740 428 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 GTF2IP13-201ENST00000438487 386 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 AC107399.1-201ENST00000451226 265 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.95□□□□□ -1.94
PKP4Q99569 Y_RNA.635-201ENST00000459041 101 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 AC146507.2-201ENST00000460608 476 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 KC877373.1-201ENST00000479066 408 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 SNORA31.3-201ENST00000516029 96 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 RNU6-559P-201ENST00000516151 98 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 SNORA74D-201ENST00000516404 141 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 RNU6-256P-201ENST00000516747 97 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 RNU6-1088P-201ENST00000516850 104 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.95□□□□□ -1.94
PKP4Q99569 AP005597.4-201ENST00000526762 229 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.95□□□□□ -1.94
PKP4Q99569 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.95□□□□□ -1.94
PKP4Q99569 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.95□□□□□ -1.94
PKP4Q99569 AL391261.3-201ENST00000557194 520 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 FRG2DP-202ENST00000566967 323 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 AC022432.1-201ENST00000595739 310 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 AC136601.2-201ENST00000604356 474 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.95□□□□□ -1.94
PKP4Q99569 U2.17-201ENST00000611454 95 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.95□□□□□ -1.94
PKP4Q99569 MIR8057-201ENST00000620957 69 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 AC007318.2-201ENST00000620999 243 ntBASIC2.95□□□□□ -1.94
PKP4Q99569 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PKP4Q99569 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PKP4Q99569 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PKP4Q99569 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.95□□□□□ -1.94
PKP4Q99569 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PKP4Q99569 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.94□□□□□ -1.94
PKP4Q99569 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.94□□□□□ -1.94
PKP4Q99569 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.94□□□□□ -1.94
PKP4Q99569 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
PKP4Q99569 RNU6-1252P-201ENST00000363054 104 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 RNU6-254P-201ENST00000363377 107 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.94□□□□□ -1.94
PKP4Q99569 RNU6-434P-201ENST00000384376 107 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 RNU6-393P-201ENST00000384475 107 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 RNU6-692P-201ENST00000384496 107 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 RNU6-140P-201ENST00000384566 108 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 SNORA16.2-201ENST00000390991 127 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 SNORD70.1-201ENST00000391007 85 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 CISD1P1-201ENST00000393907 327 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 MIR888-201ENST00000401186 77 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 MIR548K-201ENST00000408406 116 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 MIR548F5-201ENST00000408421 86 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 RN7SKP123-201ENST00000410732 291 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 AC074085.1-201ENST00000413598 418 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 BX682237.1-201ENST00000415016 335 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 AC007919.1-201ENST00000429380 217 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 AL591704.1-201ENST00000432574 275 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.94□□□□□ -1.94
PKP4Q99569 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.94□□□□□ -1.94
PKP4Q99569 RPL21P2-201ENST00000440049 481 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.94□□□□□ -1.94
PKP4Q99569 RN7SL75P-201ENST00000461926 281 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 DYNLL1P5-201ENST00000467158 270 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 AL160314.1-201ENST00000490836 438 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 RPL39P5-202ENST00000512505 151 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms