Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 AC134026.1-201ENST00000623249 2239 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-78P-201ENST00000362897 107 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-105P-201ENST00000363909 104 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 SNORA70.4-201ENST00000365509 134 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-245P-201ENST00000384020 107 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 SNORA29-201ENST00000384183 140 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 MIR616-201ENST00000385293 97 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-882P-201ENST00000391025 103 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 RN7SKP202-201ENST00000410439 330 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 FABP5P15-201ENST00000453566 214 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 RN7SL810P-201ENST00000493031 276 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 AP002826.1-201ENST00000608835 315 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 CPHL1P-201ENST00000461341 3407 ntBASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NKX2-3Q8TAU0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 AC112198.2-201ENST00000426589 6996 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-235P-201ENST00000362644 107 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 RNU2-54P-201ENST00000410299 190 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 AL358075.3-201ENST00000426289 226 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 RPS29P17-201ENST00000430795 166 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 AC011998.1-201ENST00000433403 117 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 AL391903.3-201ENST00000612158 163 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 AC004467.1-201ENST00000615678 330 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 AC013791.1-201ENST00000616619 62 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 MFSD8-242ENST00000641690 4199 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 AP001642.1-201ENST00000624727 2117 ntBASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NKX2-3Q8TAU0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 Y_RNA.35-201ENST00000362601 101 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 RNU5F-3P-201ENST00000363767 117 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-294P-201ENST00000364999 102 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 Y_RNA.393-201ENST00000383936 102 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-142P-201ENST00000384019 107 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-1310P-201ENST00000384153 107 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 MIR554-201ENST00000384874 96 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-837P-201ENST00000391056 108 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 AL358232.1-201ENST00000448030 501 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 AC092798.1-201ENST00000458542 409 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-625P-201ENST00000459412 107 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 SNORD33.1-201ENST00000516213 88 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-155P-201ENST00000516347 100 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 AC023632.4-201ENST00000517783 191 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 AC107918.3-201ENST00000533272 382 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 AC005086.4-201ENST00000623065 213 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 AC241585.2-209ENST00000638217 143 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.34□□□□□ -1.55
NKX2-3Q8TAU0 AC008079.2-201ENST00000623543 20396 ntBASIC5.34□□□□□ -1.56
NKX2-3Q8TAU0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-166P-201ENST00000384371 107 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-768P-201ENST00000384683 107 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-628P-201ENST00000410675 107 ntBASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.33□□□□□ -1.56
NKX2-3Q8TAU0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms