Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 RNU4-43P-201ENST00000410628 137 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 AC009237.8-201ENST00000445492 379 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 SNORD125-201ENST00000459538 96 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 RN7SL319P-201ENST00000480656 221 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 RPS4XP13-201ENST00000483219 789 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 RPL23AP70-201ENST00000483361 460 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 SNORA31.23-201ENST00000517219 133 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 RPL23AP53-201ENST00000521854 457 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 AL591926.8-201ENST00000616876 211 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 uc_338.7-201ENST00000621834 124 ntBASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHISA2Q6UWI4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC126755.2-208ENST00000327792 462 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC138969.1-213ENST00000331436 462 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 RN7SKP185-201ENST00000362813 326 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 RNU6-778P-201ENST00000363269 103 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 Y_RNA.280-201ENST00000364765 112 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 U8.7-201ENST00000364940 136 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 Y_RNA.368-201ENST00000365547 113 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC068538.1-201ENST00000376856 336 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 RNA5SP113-201ENST00000410486 84 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC244098.2-201ENST00000422068 99 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 SNORA70.16-201ENST00000516390 95 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 RNU1-103P-201ENST00000516502 125 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC005255.1-201ENST00000593748 216 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 IPO5P1-202ENST00000600039 287 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AC006065.5-201ENST00000623427 349 ntBASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA2Q6UWI4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHISA2Q6UWI4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHISA2Q6UWI4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SHISA2Q6UWI4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SHISA2Q6UWI4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SHISA2Q6UWI4 SNORD115-30-201ENST00000364117 82 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 RNA5SP90-201ENST00000364801 99 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 RNU6-728P-201ENST00000365375 104 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 RNU6-140P-201ENST00000384566 108 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 AL606845.1-201ENST00000404881 255 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 HMGB1P22-201ENST00000505315 124 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 RNU6-561P-201ENST00000516222 102 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 RN7SKP276-201ENST00000516242 268 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 Y_RNA.757-201ENST00000578934 114 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SHISA2Q6UWI4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHISA2Q6UWI4 ADAM3A-203ENST00000461344 2157 ntBASIC4□□□□□ -1.77
SHISA2Q6UWI4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4□□□□□ -1.77
SHISA2Q6UWI4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SHISA2Q6UWI4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SHISA2Q6UWI4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA2Q6UWI4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA2Q6UWI4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA2Q6UWI4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.99□□□□□ -1.77
SHISA2Q6UWI4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SHISA2Q6UWI4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA2Q6UWI4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms