Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 U2.16-201ENST00000613119 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 U2.12-201ENST00000613778 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 U2.9-201ENST00000615427 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 U2.11-201ENST00000616345 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 U2.2-201ENST00000616535 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 RN7SL853P-201ENST00000617250 223 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 U2.3-201ENST00000617785 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 U2.19-201ENST00000618602 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 RNU2-1-201ENST00000618664 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 U2.6-201ENST00000619225 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 U2.5-201ENST00000619465 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 U2.10-201ENST00000620268 191 ntBASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
PRPF38BQ5VTL8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 Y_RNA.101-201ENST00000363154 102 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 RNU6-153P-201ENST00000364422 104 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 Y_RNA.238-201ENST00000364441 102 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 RNU6-1248P-201ENST00000391096 64 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AL512633.1-201ENST00000399931 655 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 RPL30P12-201ENST00000474666 353 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AL049873.1-201ENST00000480540 376 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 RNU6-966P-201ENST00000516479 104 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 MIR5685-201ENST00000579080 79 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AL451007.1-201ENST00000595491 289 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AL121932.1-201ENST00000605542 214 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AC091932.3-201ENST00000624223 323 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AC006971.1-201ENST00000407916 4486 ntBASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF38BQ5VTL8 AC125257.1-201ENST00000560400 2930 ntBASIC5.09□□□□□ -1.6
PRPF38BQ5VTL8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF38BQ5VTL8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF38BQ5VTL8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
PRPF38BQ5VTL8 Y_RNA.182-201ENST00000363880 111 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-312P-201ENST00000364629 107 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 Y_RNA.273-201ENST00000364703 102 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-1310P-201ENST00000384153 107 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 MIR888-201ENST00000401186 77 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 AL357515.1-201ENST00000402967 542 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 RPS20P14-201ENST00000412545 360 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 RAB28P5-201ENST00000427490 651 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 AC008267.6-201ENST00000441664 139 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 RPL39P29-201ENST00000447779 157 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 AC000111.2-201ENST00000448200 210 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 AP000705.1-201ENST00000454567 350 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-581P-201ENST00000516214 105 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 AC009163.5-201ENST00000575421 637 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 AC100821.1-201ENST00000523153 2479 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 AL136964.1-201ENST00000622038 2990 ntBASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF38BQ5VTL8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-600P-201ENST00000362524 99 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 RNU6-793P-201ENST00000384233 104 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 NDUFS5P4-201ENST00000412983 318 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 NDUFB4P8-201ENST00000435351 367 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 AC114982.1-201ENST00000469402 321 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 RPL36AP41-201ENST00000493820 306 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 MIR7853-201ENST00000584820 132 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 DEFB117-201ENST00000602356 141 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 AL008718.3-201ENST00000610217 321 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 AC099654.7-201ENST00000635788 2127 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 MIR3529-201ENST00000637713 78 ntBASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.07□□□□□ -1.6
PRPF38BQ5VTL8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PRPF38BQ5VTL8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms