Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SNRPGP16-201ENST00000533275 226 ntBASIC2.99□□□□□ -1.93
LTBQ06643 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.99□□□□□ -1.93
LTBQ06643 AC025423.5-201ENST00000550230 219 ntBASIC2.99□□□□□ -1.93
LTBQ06643 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.99□□□□□ -1.93
LTBQ06643 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.99□□□□□ -1.93
LTBQ06643 AC136443.5-201ENST00000603741 370 ntBASIC2.99□□□□□ -1.93
LTBQ06643 AC007938.3-201ENST00000604965 623 ntBASIC2.99□□□□□ -1.93
LTBQ06643 AC009229.3-201ENST00000608056 282 ntBASIC2.99□□□□□ -1.93
LTBQ06643 ATP5A1P2-202ENST00000616464 443 ntBASIC2.99□□□□□ -1.93
LTBQ06643 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.99□□□□□ -1.93
LTBQ06643 AC008121.3-201ENST00000618726 433 ntBASIC2.99□□□□□ -1.93
LTBQ06643 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
LTBQ06643 AC118273.1-201ENST00000525324 3006 ntBASIC2.99□□□□□ -1.93
LTBQ06643 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
LTBQ06643 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LTBQ06643 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.99□□□□□ -1.93
LTBQ06643 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LTBQ06643 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.99□□□□□ -1.93
LTBQ06643 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.98□□□□□ -1.93
LTBQ06643 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LTBQ06643 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.98□□□□□ -1.93
LTBQ06643 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.98□□□□□ -1.93
LTBQ06643 ZNF826P-207ENST00000622273 1910 ntBASIC2.98□□□□□ -1.93
LTBQ06643 RNU6-266P-201ENST00000364225 107 ntBASIC2.98□□□□□ -1.93
LTBQ06643 RNU6-639P-201ENST00000384074 107 ntBASIC2.98□□□□□ -1.93
LTBQ06643 RNU6-890P-201ENST00000384121 107 ntBASIC2.98□□□□□ -1.93
LTBQ06643 Y_RNA.459-201ENST00000384251 102 ntBASIC2.98□□□□□ -1.93
LTBQ06643 RNU6-1050P-201ENST00000410388 107 ntBASIC2.98□□□□□ -1.93
LTBQ06643 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.98□□□□□ -1.93
LTBQ06643 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.98□□□□□ -1.93
LTBQ06643 AL592045.1-201ENST00000429867 352 ntBASIC2.98□□□□□ -1.93
LTBQ06643 HMGB1P27-201ENST00000431429 603 ntBASIC2.98□□□□□ -1.93
LTBQ06643 AL359672.1-201ENST00000442302 409 ntBASIC2.98□□□□□ -1.93
LTBQ06643 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.98□□□□□ -1.93
LTBQ06643 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.98□□□□□ -1.93
LTBQ06643 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.98□□□□□ -1.93
LTBQ06643 snoU13.4-201ENST00000458916 104 ntBASIC2.98□□□□□ -1.93
LTBQ06643 RPL7P5-201ENST00000471472 736 ntBASIC2.98□□□□□ -1.93
LTBQ06643 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.98□□□□□ -1.93
LTBQ06643 RPL7P42-201ENST00000481005 679 ntBASIC2.98□□□□□ -1.93
LTBQ06643 AC108860.1-201ENST00000484521 383 ntBASIC2.98□□□□□ -1.93
LTBQ06643 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.98□□□□□ -1.93
LTBQ06643 AC092436.3-201ENST00000511788 257 ntBASIC2.98□□□□□ -1.93
LTBQ06643 PTP4A1P4-201ENST00000512479 322 ntBASIC2.98□□□□□ -1.93
LTBQ06643 APOOP4-201ENST00000513530 597 ntBASIC2.98□□□□□ -1.93
LTBQ06643 Y_RNA.670-201ENST00000516255 105 ntBASIC2.98□□□□□ -1.93
LTBQ06643 AC068657.1-201ENST00000520807 306 ntBASIC2.98□□□□□ -1.93
LTBQ06643 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.98□□□□□ -1.93
LTBQ06643 AC026371.1-201ENST00000551867 419 ntBASIC2.98□□□□□ -1.93
LTBQ06643 MIR4276-201ENST00000584832 70 ntBASIC2.98□□□□□ -1.93
LTBQ06643 uc_338.1-201ENST00000612113 180 ntBASIC2.98□□□□□ -1.93
LTBQ06643 AC034102.8-201ENST00000615146 484 ntBASIC2.98□□□□□ -1.93
LTBQ06643 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.98□□□□□ -1.93
LTBQ06643 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
LTBQ06643 AC092608.2-201ENST00000624427 218 ntBASIC2.98□□□□□ -1.93
LTBQ06643 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
LTBQ06643 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LTBQ06643 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.98□□□□□ -1.93
LTBQ06643 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
LTBQ06643 MTND5P30-201ENST00000452896 1731 ntBASIC2.98□□□□□ -1.93
LTBQ06643 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.97□□□□□ -1.93
LTBQ06643 OR4G2P-202ENST00000641004 1759 ntBASIC2.97□□□□□ -1.93
LTBQ06643 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LTBQ06643 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LTBQ06643 UBE2L2-201ENST00000254302 429 ntBASIC2.97□□□□□ -1.93
LTBQ06643 RNU6-1115P-201ENST00000362490 106 ntBASIC2.97□□□□□ -1.93
LTBQ06643 RNU5A-1-201ENST00000362698 116 ntBASIC2.97□□□□□ -1.93
LTBQ06643 SNORD3E-201ENST00000362899 217 ntBASIC2.97□□□□□ -1.93
LTBQ06643 Y_RNA.148-201ENST00000363557 117 ntBASIC2.97□□□□□ -1.93
LTBQ06643 RNU6-512P-201ENST00000364438 103 ntBASIC2.97□□□□□ -1.93
LTBQ06643 RNU6-593P-201ENST00000364716 112 ntBASIC2.97□□□□□ -1.93
LTBQ06643 RNU6-1040P-201ENST00000383974 107 ntBASIC2.97□□□□□ -1.93
LTBQ06643 RNU6-306P-201ENST00000384617 107 ntBASIC2.97□□□□□ -1.93
LTBQ06643 RNU6-328P-201ENST00000390887 106 ntBASIC2.97□□□□□ -1.93
LTBQ06643 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LTBQ06643 Y_RNA.594-201ENST00000410373 140 ntBASIC2.97□□□□□ -1.93
LTBQ06643 AL513331.1-201ENST00000411908 397 ntBASIC2.97□□□□□ -1.93
LTBQ06643 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.97□□□□□ -1.93
LTBQ06643 AC063979.1-201ENST00000415539 377 ntBASIC2.97□□□□□ -1.93
LTBQ06643 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LTBQ06643 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.97□□□□□ -1.93
LTBQ06643 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.97□□□□□ -1.93
LTBQ06643 AC021146.2-201ENST00000504736 556 ntBASIC2.97□□□□□ -1.93
LTBQ06643 RNU6-927P-201ENST00000516199 100 ntBASIC2.97□□□□□ -1.93
LTBQ06643 SCARNA20.6-201ENST00000517251 106 ntBASIC2.97□□□□□ -1.93
LTBQ06643 RNU6-988P-201ENST00000519081 107 ntBASIC2.97□□□□□ -1.93
LTBQ06643 AC087854.1-201ENST00000519706 414 ntBASIC2.97□□□□□ -1.93
LTBQ06643 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
LTBQ06643 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.97□□□□□ -1.93
LTBQ06643 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.97□□□□□ -1.93
LTBQ06643 SYF2P1-201ENST00000550658 413 ntBASIC2.97□□□□□ -1.93
LTBQ06643 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.97□□□□□ -1.93
LTBQ06643 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.97□□□□□ -1.93
LTBQ06643 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.97□□□□□ -1.93
LTBQ06643 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.97□□□□□ -1.93
LTBQ06643 AC018462.2-201ENST00000605375 395 ntBASIC2.97□□□□□ -1.93
LTBQ06643 SNORD39.4-201ENST00000620099 78 ntBASIC2.97□□□□□ -1.93
LTBQ06643 AC092628.2-201ENST00000622492 339 ntBASIC2.97□□□□□ -1.93
LTBQ06643 U6.98-201ENST00000637157 84 ntBASIC2.97□□□□□ -1.93
LTBQ06643 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms