Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AL121890.5-201ENST00000620848 304 ntBASIC0.91□□□□□ -2.26
HIST1H2BDP58876 AC022513.1-201ENST00000624512 117 ntBASIC0.91□□□□□ -2.26
HIST1H2BDP58876 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HIST1H2BDP58876 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC0.91□□□□□ -2.26
HIST1H2BDP58876 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HIST1H2BDP58876 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.9□□□□□ -2.26
HIST1H2BDP58876 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 RNU6-414P-201ENST00000363705 104 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 RNU4-13P-201ENST00000364019 141 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 RNA5SP390-201ENST00000410191 113 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 Y_RNA.623-201ENST00000411128 95 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC092648.1-201ENST00000425870 423 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 CBX3P6-201ENST00000430257 527 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 LARP1BP3-201ENST00000437229 869 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 HMGB3P12-201ENST00000438745 556 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 CALM1P1-201ENST00000442082 433 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC130509.1-201ENST00000464158 433 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC009646.1-201ENST00000510455 318 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC109445.1-201ENST00000512356 383 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC087276.1-201ENST00000529659 480 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 MIR3158-1-201ENST00000583596 81 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC005786.1-201ENST00000588553 154 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 VN1R82P-201ENST00000601481 356 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC026790.2-201ENST00000606282 430 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AL355816.2-201ENST00000610049 647 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H2BDP58876 AC068205.3-201ENST00000636385 468 ntBASIC0.9□□□□□ -2.27
HIST1H2BDP58876 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 RNA5SP387-201ENST00000364226 106 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 SNORD116-20-201ENST00000384529 92 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 RNU6-296P-201ENST00000384608 107 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 MIR513A1-201ENST00000385138 129 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 MIR618-201ENST00000385287 98 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 RNU1-123P-201ENST00000458950 160 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 OR2A41P-201ENST00000473586 105 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 RPL26P26-201ENST00000480251 434 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AC069306.1-201ENST00000507006 843 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 RNA5SP216-201ENST00000516111 123 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AC009712.1-201ENST00000564938 316 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AC012414.6-201ENST00000568241 401 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AL159153.1-201ENST00000619688 317 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 MIR8063-201ENST00000621930 81 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AP000943.4-201ENST00000622912 357 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 AC092881.1-201ENST00000638218 2733 ntBASIC0.89□□□□□ -2.27
HIST1H2BDP58876 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
HIST1H2BDP58876 ICE2P2-201ENST00000483823 2787 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 SNORD3E-201ENST00000362899 217 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 RNU6-7-201ENST00000364784 107 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 RNU6-8-201ENST00000365467 107 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC139712.2-201ENST00000424302 339 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC027119.1-201ENST00000440877 241 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 RPL30P7-201ENST00000479312 323 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC119751.4-201ENST00000507498 357 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 HSPE1P18-201ENST00000517602 280 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 KC877982.1-201ENST00000602313 470 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC022022.2-201ENST00000602989 360 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 BCRP9-201ENST00000605312 388 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC025754.2-201ENST00000606491 432 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 MIR7106-201ENST00000612419 65 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AL078604.3-201ENST00000615580 211 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC120349.3-201ENST00000624377 529 ntBASIC0.88□□□□□ -2.27
HIST1H2BDP58876 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H2BDP58876 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms