Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 RNA5SP390-201ENST00000410191 113 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 RNU2-23P-201ENST00000410545 195 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ATP1B3P54709 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.86□□□□□ -2.11
ATP1B3P54709 MTND4P20-201ENST00000424125 869 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 MTND6P13-201ENST00000443510 523 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 snoU13.14-201ENST00000459372 104 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.86□□□□□ -2.11
ATP1B3P54709 RN7SKP287-201ENST00000516546 266 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 SNORA43.2-201ENST00000516652 128 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 AC106038.2-201ENST00000520706 568 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ATP1B3P54709 AC026271.5-201ENST00000577873 130 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 SNORD53-201ENST00000579969 78 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 AC012065.4-201ENST00000602445 679 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 ELOCP5-201ENST00000604924 333 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 AC012360.2-201ENST00000609349 391 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 AC138649.3-201ENST00000622154 254 ntBASIC1.86□□□□□ -2.11
ATP1B3P54709 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ATP1B3P54709 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.85□□□□□ -2.11
ATP1B3P54709 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
ATP1B3P54709 RNU6-655P-201ENST00000362858 107 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 RNU6-371P-201ENST00000364283 108 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
ATP1B3P54709 RAP1BP3-201ENST00000407180 549 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.85□□□□□ -2.11
ATP1B3P54709 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.85□□□□□ -2.11
ATP1B3P54709 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.85□□□□□ -2.11
ATP1B3P54709 HMGN2P38-201ENST00000423806 265 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 CALM2P2-201ENST00000428512 440 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.85□□□□□ -2.11
ATP1B3P54709 MTND1P30-201ENST00000441241 901 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AL136380.1-201ENST00000447970 162 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AL021397.1-201ENST00000451806 248 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AL121594.1-201ENST00000475906 575 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 RBBP4P6-201ENST00000508098 202 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.85□□□□□ -2.11
ATP1B3P54709 AC119751.5-201ENST00000514077 770 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 RNU6-232P-201ENST00000517144 64 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.85□□□□□ -2.11
ATP1B3P54709 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.85□□□□□ -2.11
ATP1B3P54709 RANP3-201ENST00000530970 276 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 ZNF321P-202ENST00000550843 495 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AC008015.1-201ENST00000555505 465 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.85□□□□□ -2.11
ATP1B3P54709 AC005771.1-201ENST00000585581 349 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 SNRPGP17-201ENST00000603780 214 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AC093424.1-201ENST00000604999 338 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.85□□□□□ -2.11
ATP1B3P54709 RMST_4.1-201ENST00000616886 107 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AC108479.2-201ENST00000617314 601 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.85□□□□□ -2.11
ATP1B3P54709 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.85□□□□□ -2.11
ATP1B3P54709 AC243829.7-201ENST00000633081 225 ntBASIC1.85□□□□□ -2.11
ATP1B3P54709 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.85□□□□□ -2.11
ATP1B3P54709 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.84□□□□□ -2.11
ATP1B3P54709 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
ATP1B3P54709 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ATP1B3P54709 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
ATP1B3P54709 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ATP1B3P54709 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.84□□□□□ -2.11
ATP1B3P54709 Y_RNA.111-201ENST00000363248 100 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 RNU6-1210P-201ENST00000363775 107 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 RNU6-553P-201ENST00000364047 96 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ATP1B3P54709 SNORA46.1-201ENST00000391069 153 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AL031577.2-201ENST00000404133 280 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AL512604.1-201ENST00000404812 257 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.84□□□□□ -2.11
ATP1B3P54709 AC074117.2-201ENST00000417130 397 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 TOMM20P4-201ENST00000427861 435 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 MTND5P25-201ENST00000430499 799 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AC104850.1-201ENST00000435940 476 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.84□□□□□ -2.11
ATP1B3P54709 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.84□□□□□ -2.11
ATP1B3P54709 BZW1P2-201ENST00000473537 826 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 HMGB1P35-201ENST00000503360 598 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AC116562.3-201ENST00000506136 177 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ATP1B3P54709 SCARNA24.1-201ENST00000516465 137 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 SCARNA16.3-201ENST00000516595 184 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 Vault.3-201ENST00000516676 95 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 RNU2-46P-201ENST00000517038 113 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 RN7SKP256-201ENST00000517201 314 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.84□□□□□ -2.11
ATP1B3P54709 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.84□□□□□ -2.11
ATP1B3P54709 AC068587.5-201ENST00000528506 175 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.84□□□□□ -2.11
ATP1B3P54709 SNRPGP18-201ENST00000553000 214 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.84□□□□□ -2.11
ATP1B3P54709 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.84□□□□□ -2.11
ATP1B3P54709 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.84□□□□□ -2.11
ATP1B3P54709 MIR5692A1-201ENST00000580523 69 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.84□□□□□ -2.11
ATP1B3P54709 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AL109918.3-201ENST00000603072 338 ntBASIC1.84□□□□□ -2.11
ATP1B3P54709 AC009159.2-201ENST00000617603 606 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms