Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNU6-1114P-201ENST00000516022 107 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 RNU6-346P-201ENST00000516288 111 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 YPEL5P3-201ENST00000547227 352 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXD8P13378 AC027288.2-201ENST00000553028 243 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 H3F3AP1-201ENST00000559984 334 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXD8P13378 MIR5685-201ENST00000579080 79 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.54□□□□□ -1.68
HOXD8P13378 RPL23AP88-201ENST00000605759 454 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXD8P13378 AL354798.1-201ENST00000622505 329 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 MIR6715B-201ENST00000637172 77 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 AC241585.2-209ENST00000638217 143 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HOXD8P13378 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXD8P13378 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXD8P13378 AL359693.1-201ENST00000614959 2407 ntBASIC4.54□□□□□ -1.68
HOXD8P13378 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXD8P13378 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXD8P13378 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXD8P13378 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXD8P13378 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXD8P13378 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD8P13378 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HOXD8P13378 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD8P13378 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD8P13378 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD8P13378 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 RNA5SP361-201ENST00000362686 118 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 RNU6-335P-201ENST00000364563 113 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 SNORD50B-201ENST00000364995 70 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 RNU6-318P-201ENST00000384283 103 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 RN7SKP51-201ENST00000410781 304 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 AC244098.2-201ENST00000422068 99 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 AC026726.1-201ENST00000512859 601 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 MIR5695-201ENST00000579717 85 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 AL161756.2-201ENST00000604597 246 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 AP001485.1-201ENST00000604799 199 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 RNA5SP108-201ENST00000605921 117 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 AC104465.1-201ENST00000611365 139 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 AC005296.1-201ENST00000616145 209 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD8P13378 IGHVIII-44-202ENST00000636235 289 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD8P13378 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD8P13378 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HOXD8P13378 AL139811.1-201ENST00000424779 2299 ntBASIC4.53□□□□□ -1.68
HOXD8P13378 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HOXD8P13378 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD8P13378 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD8P13378 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXD8P13378 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD8P13378 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HOXD8P13378 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD8P13378 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXD8P13378 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD8P13378 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD8P13378 AL353743.1-202ENST00000431724 1695 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 RNU6-923P-201ENST00000364753 107 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 RNU6-1286P-201ENST00000383871 107 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 PTMAP2-201ENST00000397627 327 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXD8P13378 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXD8P13378 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD8P13378 EIF1P2-201ENST00000428233 350 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 AL445584.1-201ENST00000431451 330 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 MTCO1P5-201ENST00000433573 344 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 CYCSP32-201ENST00000440548 321 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 AL133547.1-201ENST00000448546 220 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 AL500522.2-201ENST00000448562 343 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 snoU13.4-201ENST00000458916 104 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 AC087477.1-201ENST00000465747 340 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXD8P13378 AC117440.1-201ENST00000474107 571 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 RPL30P1-201ENST00000488676 339 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXD8P13378 RNU7-143P-201ENST00000516781 65 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXD8P13378 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXD8P13378 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXD8P13378 AC012442.3-202ENST00000636742 206 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD8P13378 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HOXD8P13378 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXD8P13378 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD8P13378 Z73965.1-201ENST00000623412 2297 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 AC135776.4-201ENST00000624300 1904 ntBASIC4.52□□□□□ -1.69
HOXD8P13378 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms