Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTCD1O75127 AC007785.2-201ENST00000598627 1916 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 AL359693.1-201ENST00000614959 2407 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.95□□□□□ -1.62
PTCD1O75127 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTCD1O75127 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
PTCD1O75127 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTCD1O75127 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCD1O75127 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PTCD1O75127 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTCD1O75127 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTCD1O75127 Z75746.1-201ENST00000440243 2080 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 AL391987.6-201ENST00000305671 199 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 Y_RNA.16-201ENST00000362421 102 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 RNU6-227P-201ENST00000362865 103 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 RNU1-76P-201ENST00000362903 159 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 RNU6-704P-201ENST00000364162 103 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 RNU6-378P-201ENST00000384324 107 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 RNU6-1081P-201ENST00000384537 107 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 MIR483-201ENST00000385070 76 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 MIR325-201ENST00000385260 98 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 PTMAP5-201ENST00000393073 333 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCD1O75127 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.94□□□□□ -1.62
PTCD1O75127 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTCD1O75127 AC098614.2-201ENST00000426040 255 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 RPL21P66-201ENST00000426566 466 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.94□□□□□ -1.62
PTCD1O75127 AC079354.2-201ENST00000453523 154 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 RNU7-120P-201ENST00000459334 63 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 RNU7-87P-201ENST00000459343 62 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 RN7SL585P-201ENST00000470538 280 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 SNORA70.24-201ENST00000517233 118 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 AC091144.1-201ENST00000519573 138 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.94□□□□□ -1.62
PTCD1O75127 CYP4A43P-201ENST00000568156 121 ntBASIC4.94□□□□□ -1.62
PTCD1O75127 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTCD1O75127 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTCD1O75127 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PTCD1O75127 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTCD1O75127 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
PTCD1O75127 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTCD1O75127 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PTCD1O75127 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTCD1O75127 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
PTCD1O75127 AC090740.1-201ENST00000623193 2262 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCD1O75127 MIR335-201ENST00000362173 94 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 Y_RNA.352-201ENST00000365439 102 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 RNU6-611P-201ENST00000384276 104 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 RNVU1-14-201ENST00000384770 164 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 COX6CP10-201ENST00000416832 224 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 AP000907.1-201ENST00000428428 510 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCD1O75127 SNRPEP9-201ENST00000436794 238 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 HMGB1P37-201ENST00000439613 609 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCD1O75127 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCD1O75127 RN7SKP210-201ENST00000459176 261 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 RPS29P27-201ENST00000463711 170 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 RNU6-513P-201ENST00000516104 104 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 AC006077.1-201ENST00000604746 343 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 AL365265.1-201ENST00000621045 234 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 AL773545.4-201ENST00000637262 310 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 AL513478.4-201ENST00000641636 310 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCD1O75127 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PTCD1O75127 AP000560.1-201ENST00000624150 1937 ntBASIC4.93□□□□□ -1.62
PTCD1O75127 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTCD1O75127 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCD1O75127 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCD1O75127 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCD1O75127 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCD1O75127 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTCD1O75127 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCD1O75127 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTCD1O75127 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
PTCD1O75127 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PTCD1O75127 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTCD1O75127 RNU6-1290P-201ENST00000362957 109 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 Y_RNA.83-201ENST00000363005 113 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 RNU6-336P-201ENST00000364891 107 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 Y_RNA.358-201ENST00000365491 99 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 MIR190B-201ENST00000401119 79 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 RPS6P12-201ENST00000432491 726 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.92□□□□□ -1.62
PTCD1O75127 Z82210.1-201ENST00000440037 231 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 AC025554.1-201ENST00000505641 188 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 PPBPP1-201ENST00000510807 373 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 RN7SKP18-201ENST00000516005 275 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 SNORA74D-201ENST00000516404 141 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 RNU6-861P-201ENST00000516745 106 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 IGKV2-38-201ENST00000517443 247 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 AC010186.2-204ENST00000537668 439 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCD1O75127 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.92□□□□□ -1.62
PTCD1O75127 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCD1O75127 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCD1O75127 AC136601.2-201ENST00000604356 474 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 RNU1-30P-201ENST00000606575 163 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms