Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC7.85□□□□□ -1.15
MSH5O43196 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC7.85□□□□□ -1.15
MSH5O43196 AC022695.1-201ENST00000522089 237 ntBASIC7.85□□□□□ -1.15
MSH5O43196 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.85□□□□□ -1.15
MSH5O43196 MIR3117-201ENST00000584034 78 ntBASIC7.85□□□□□ -1.15
MSH5O43196 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MSH5O43196 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MSH5O43196 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MSH5O43196 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
MSH5O43196 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
MSH5O43196 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
MSH5O43196 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
MSH5O43196 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
MSH5O43196 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
MSH5O43196 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.84□□□□□ -1.15
MSH5O43196 SNORA63.2-201ENST00000362603 126 ntBASIC7.84□□□□□ -1.15
MSH5O43196 UBBP2-201ENST00000376781 231 ntBASIC7.84□□□□□ -1.15
MSH5O43196 RN7SKP200-201ENST00000410564 320 ntBASIC7.84□□□□□ -1.15
MSH5O43196 UBE2Q2P12-201ENST00000414573 204 ntBASIC7.84□□□□□ -1.15
MSH5O43196 TOMM22P1-201ENST00000418578 312 ntBASIC7.84□□□□□ -1.15
MSH5O43196 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.84□□□□□ -1.15
MSH5O43196 AC009120.3-201ENST00000563335 499 ntBASIC7.84□□□□□ -1.15
MSH5O43196 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC7.84□□□□□ -1.15
MSH5O43196 U73479.1-201ENST00000618062 168 ntBASIC7.84□□□□□ -1.15
MSH5O43196 AC005086.4-201ENST00000623065 213 ntBASIC7.84□□□□□ -1.15
MSH5O43196 AC006435.5-201ENST00000624486 112 ntBASIC7.84□□□□□ -1.15
MSH5O43196 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
MSH5O43196 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC7.84□□□□□ -1.15
MSH5O43196 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
MSH5O43196 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.84□□□□□ -1.16
MSH5O43196 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.83□□□□□ -1.16
MSH5O43196 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.83□□□□□ -1.16
MSH5O43196 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
MSH5O43196 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
MSH5O43196 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
MSH5O43196 RNU6-161P-201ENST00000363051 106 ntBASIC7.83□□□□□ -1.16
MSH5O43196 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
MSH5O43196 RNU6-140P-201ENST00000384566 108 ntBASIC7.83□□□□□ -1.16
MSH5O43196 snoU13.11-201ENST00000459219 104 ntBASIC7.83□□□□□ -1.16
MSH5O43196 SNORD36C-201ENST00000516733 66 ntBASIC7.83□□□□□ -1.16
MSH5O43196 RNU6-807P-201ENST00000516805 107 ntBASIC7.83□□□□□ -1.16
MSH5O43196 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.83□□□□□ -1.16
MSH5O43196 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
MSH5O43196 AC106785.1-201ENST00000565935 262 ntBASIC7.83□□□□□ -1.16
MSH5O43196 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.83□□□□□ -1.16
MSH5O43196 U2.21-201ENST00000637295 81 ntBASIC7.83□□□□□ -1.16
MSH5O43196 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
MSH5O43196 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
MSH5O43196 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
MSH5O43196 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
MSH5O43196 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
MSH5O43196 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
MSH5O43196 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.83□□□□□ -1.16
MSH5O43196 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
MSH5O43196 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
MSH5O43196 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.82□□□□□ -1.16
MSH5O43196 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.82□□□□□ -1.16
MSH5O43196 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
MSH5O43196 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.82□□□□□ -1.16
MSH5O43196 RNU6-171P-201ENST00000384354 107 ntBASIC7.82□□□□□ -1.16
MSH5O43196 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
MSH5O43196 CYCSP48-201ENST00000417124 323 ntBASIC7.82□□□□□ -1.16
MSH5O43196 KRT8P51-201ENST00000438938 274 ntBASIC7.82□□□□□ -1.16
MSH5O43196 BX510359.5-201ENST00000515651 304 ntBASIC7.82□□□□□ -1.16
MSH5O43196 RNU6-1231P-201ENST00000517185 103 ntBASIC7.82□□□□□ -1.16
MSH5O43196 IGKV1D-22-201ENST00000518953 324 ntBASIC7.82□□□□□ -1.16
MSH5O43196 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.82□□□□□ -1.16
MSH5O43196 UBE2Q2P6-201ENST00000612666 153 ntBASIC7.82□□□□□ -1.16
MSH5O43196 AL132640.3-201ENST00000630473 177 ntBASIC7.82□□□□□ -1.16
MSH5O43196 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.82□□□□□ -1.16
MSH5O43196 MAPK10-304ENST00000641341 3984 ntBASIC7.82□□□□□ -1.16
MSH5O43196 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.82□□□□□ -1.16
MSH5O43196 AC140479.2-201ENST00000421567 3130 ntBASIC7.82□□□□□ -1.16
MSH5O43196 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.82□□□□□ -1.16
MSH5O43196 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
MSH5O43196 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC7.82□□□□□ -1.16
MSH5O43196 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
MSH5O43196 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
MSH5O43196 AC118273.1-201ENST00000525324 3006 ntBASIC7.81□□□□□ -1.16
MSH5O43196 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.81□□□□□ -1.16
MSH5O43196 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
MSH5O43196 NOL8P1-201ENST00000508336 3529 ntBASIC7.81□□□□□ -1.16
MSH5O43196 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
MSH5O43196 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
MSH5O43196 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
MSH5O43196 RNU6-778P-201ENST00000363269 103 ntBASIC7.81□□□□□ -1.16
MSH5O43196 RNU1-73P-201ENST00000383971 164 ntBASIC7.81□□□□□ -1.16
MSH5O43196 SNORD77B-201ENST00000391112 67 ntBASIC7.81□□□□□ -1.16
MSH5O43196 SNORA68.2-201ENST00000391263 128 ntBASIC7.81□□□□□ -1.16
MSH5O43196 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.81□□□□□ -1.16
MSH5O43196 MIR548O-201ENST00000408583 114 ntBASIC7.81□□□□□ -1.16
MSH5O43196 RNU7-57P-201ENST00000459540 60 ntBASIC7.81□□□□□ -1.16
MSH5O43196 RN7SL826P-201ENST00000479724 288 ntBASIC7.81□□□□□ -1.16
MSH5O43196 AC145146.1-201ENST00000496370 254 ntBASIC7.81□□□□□ -1.16
MSH5O43196 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC7.81□□□□□ -1.16
MSH5O43196 MIR3921-201ENST00000577308 85 ntBASIC7.81□□□□□ -1.16
MSH5O43196 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
MSH5O43196 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
MSH5O43196 ZNF271P-202ENST00000465539 1970 ntBASIC7.8□□□□□ -1.16
MSH5O43196 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms