Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AL031601.2-202ENST00000622650 282 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AL732372.2-225ENST00000642124 456 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AC007656.2-201ENST00000624902 4547 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 FTLP6-201ENST00000355274 422 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 MIR412-201ENST00000362142 91 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1303P-201ENST00000364841 107 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1026P-201ENST00000384465 108 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1106P-201ENST00000390845 107 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 SKA2P1-201ENST00000425592 390 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 MTATP8P1-201ENST00000467115 207 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 AC010655.3-201ENST00000478818 450 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 RPL21P13-201ENST00000488305 481 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 MTCYBP40-201ENST00000509390 1135 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 RNU6-711P-201ENST00000517255 106 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 RN7SKP295-201ENST00000517264 153 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 RNU6-988P-201ENST00000519081 107 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 AC009902.1-201ENST00000519351 183 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 HMGB1P14-201ENST00000557424 591 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 MIR3609-201ENST00000582661 80 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 MIR4325-201ENST00000583049 90 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 AC006557.5-201ENST00000603126 811 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 HSPE1P7-201ENST00000604681 321 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 FTX_3.1-201ENST00000610451 147 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1252P-201ENST00000363054 104 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 Y_RNA.158-201ENST00000363651 101 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 Y_RNA.212-201ENST00000364177 102 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 RNU6-266P-201ENST00000364225 107 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 SNORA75B-201ENST00000384053 137 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1032P-201ENST00000384100 107 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 U3.26-201ENST00000391236 204 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 MIR450B-201ENST00000401182 78 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 U3.39-201ENST00000408569 239 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 HMGB3P2-201ENST00000411913 584 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 FABP5P14-201ENST00000437273 393 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AL049873.1-201ENST00000480540 376 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC139453.3-201ENST00000493276 369 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC110794.1-201ENST00000505816 425 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 PHBP14-201ENST00000512887 367 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC069113.1-201ENST00000517763 267 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC025755.1-201ENST00000521306 278 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 MIR4276-201ENST00000584832 70 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 MIR5692C1-201ENST00000585309 91 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC002044.1-201ENST00000606707 158 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 RMST_4.1-201ENST00000616886 107 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 U4.1-201ENST00000620349 87 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 MTND5P19-201ENST00000424872 1794 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 AL353743.1-202ENST00000431724 1695 ntBASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC187A0A096LP49 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC006504.1-201ENST00000562493 3666 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 MTND5P10-201ENST00000603719 1809 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC117470.1-201ENST00000381974 330 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1035P-201ENST00000384477 107 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 RNU2-3P-201ENST00000410144 191 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 Y_RNA.618-201ENST00000410949 107 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 RNU6-954P-201ENST00000411355 107 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 CYCSP33-201ENST00000414485 327 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 MCFD2P1-201ENST00000417812 300 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms