Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU6-626P-201ENST00000363354 107 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 RNU6-1020P-201ENST00000363684 107 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 RNA5SP175-201ENST00000364275 119 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 RNU1-100P-201ENST00000365255 165 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 RNU6-281P-201ENST00000384212 103 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 U8.10-201ENST00000384260 133 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.83□□□□□ -1.64
NOD1Q9Y239 AC074117.2-201ENST00000417130 397 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.83□□□□□ -1.64
NOD1Q9Y239 AL117339.2-201ENST00000430475 180 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.83□□□□□ -1.64
NOD1Q9Y239 AC125238.1-201ENST00000448842 249 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 AC023424.1-201ENST00000496058 459 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 AC097462.2-201ENST00000504623 481 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 Y_RNA.679-201ENST00000516416 91 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 RNA5SP49-201ENST00000516450 115 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.83□□□□□ -1.64
NOD1Q9Y239 MIR4286-201ENST00000580651 93 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 MIR6134-201ENST00000617606 109 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.83□□□□□ -1.64
NOD1Q9Y239 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.83□□□□□ -1.64
NOD1Q9Y239 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NOD1Q9Y239 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.83□□□□□ -1.64
NOD1Q9Y239 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 NEAT1-202ENST00000501122 22743 ntBASIC4.83□□□□□ -1.64
NOD1Q9Y239 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.83□□□□□ -1.64
NOD1Q9Y239 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NOD1Q9Y239 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NOD1Q9Y239 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NOD1Q9Y239 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NOD1Q9Y239 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.82□□□□□ -1.64
NOD1Q9Y239 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NOD1Q9Y239 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.82□□□□□ -1.64
NOD1Q9Y239 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NOD1Q9Y239 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NOD1Q9Y239 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NOD1Q9Y239 RNU6-858P-201ENST00000362436 107 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 RNU6-884P-201ENST00000363889 107 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 RNA5SP513-201ENST00000364648 118 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 RNU6-47P-201ENST00000383866 107 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 RNU6-514P-201ENST00000384208 107 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 Y_RNA.590-201ENST00000410140 107 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 RNU6-1140P-201ENST00000410517 106 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 RNU6-1001P-201ENST00000411265 100 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.82□□□□□ -1.64
NOD1Q9Y239 AC007969.2-201ENST00000441891 191 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 AL162151.2-201ENST00000448875 158 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 HMGB3P8-201ENST00000449709 577 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 NDUFS5P3-201ENST00000450668 321 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NOD1Q9Y239 AC117440.1-201ENST00000474107 571 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 RN7SL132P-201ENST00000478131 296 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 MRPL42P6-201ENST00000486397 371 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 AC074198.2-201ENST00000508153 258 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 RNU6-567P-201ENST00000516746 107 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.82□□□□□ -1.64
NOD1Q9Y239 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.82□□□□□ -1.64
NOD1Q9Y239 CR383656.8-201ENST00000549046 145 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.82□□□□□ -1.64
NOD1Q9Y239 AC015912.2-201ENST00000571053 181 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 MIR4429-201ENST00000580105 73 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 AL021997.2-201ENST00000615674 271 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NOD1Q9Y239 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NOD1Q9Y239 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
NOD1Q9Y239 LINC01355-201ENST00000566551 5444 ntBASIC4.82□□□□□ -1.64
NOD1Q9Y239 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NOD1Q9Y239 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NOD1Q9Y239 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NOD1Q9Y239 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NOD1Q9Y239 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.81□□□□□ -1.64
NOD1Q9Y239 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NOD1Q9Y239 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NOD1Q9Y239 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.81□□□□□ -1.64
NOD1Q9Y239 RNU6-20P-201ENST00000384106 107 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 MIR544A-201ENST00000384855 91 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 MIR487A-201ENST00000385009 80 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 MIR607-201ENST00000385241 96 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 RNU6-159P-201ENST00000391080 106 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 HLFP1-201ENST00000402375 499 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 RNU6-651P-201ENST00000411040 105 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 RNU2-61P-201ENST00000411069 191 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.81□□□□□ -1.64
NOD1Q9Y239 GPM6BP3-201ENST00000442797 145 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.81□□□□□ -1.64
NOD1Q9Y239 AP000873.1-201ENST00000463987 400 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 S100A11P1-201ENST00000477525 312 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 AC109925.1-201ENST00000478069 331 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 RPL7P47-201ENST00000497299 556 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 RNA5SP519-201ENST00000516480 119 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 RNU6-58P-201ENST00000517143 103 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 AC022559.1-201ENST00000520905 205 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 HSPE1P4-201ENST00000550617 308 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 AC006130.2-201ENST00000586202 326 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 AC012468.1-201ENST00000604888 430 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 MIR6891-201ENST00000618788 93 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 AC135776.4-201ENST00000624300 1904 ntBASIC4.81□□□□□ -1.64
NOD1Q9Y239 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NOD1Q9Y239 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NOD1Q9Y239 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms