Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPG7Q9UQ90 SET-203ENST00000372688 801 ntTSL 2 BASIC4.7□□□□□ -1.66
SPG7Q9UQ90 MIR493-201ENST00000385254 89 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 NDUFB4P4-201ENST00000404822 243 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 RNU6-1156P-201ENST00000410365 100 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.7□□□□□ -1.66
SPG7Q9UQ90 NUP35P1-201ENST00000422734 947 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AL078601.1-201ENST00000444542 271 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AC112492.4-201ENST00000456549 352 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 U8.21-201ENST00000459536 136 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 Y_RNA.687-201ENST00000516558 91 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 SCARNA13-201ENST00000516672 275 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AC110588.1-201ENST00000559699 137 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AC011471.1-201ENST00000585766 187 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AL158827.2-201ENST00000602494 330 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AC136601.2-201ENST00000604356 474 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 PRR13P7-201ENST00000605538 430 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AC099506.2-201ENST00000623074 221 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AL691447.3-201ENST00000635020 330 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 AC018555.1-201ENST00000567548 1980 ntBASIC4.7□□□□□ -1.66
SPG7Q9UQ90 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SPG7Q9UQ90 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPG7Q9UQ90 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPG7Q9UQ90 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SPG7Q9UQ90 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.69□□□□□ -1.66
SPG7Q9UQ90 RNA5SP189-201ENST00000364920 115 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 RNU6-702P-201ENST00000364982 107 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 Y_RNA.533-201ENST00000384596 114 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 AL591034.2-201ENST00000402839 359 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 AL138885.1-201ENST00000405921 675 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 AL117339.3-201ENST00000418733 162 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 AC005300.1-201ENST00000428401 373 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 FTH1P6-201ENST00000430768 320 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 SNRPEP9-201ENST00000436794 238 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.69□□□□□ -1.66
SPG7Q9UQ90 U3.44-201ENST00000458938 192 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 AK3P2-201ENST00000507976 429 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 VN1R107P-201ENST00000601784 209 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 HMGB1P24-202ENST00000615653 685 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.69□□□□□ -1.66
SPG7Q9UQ90 AP003355.3-201ENST00000623465 114 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 MIR4272-201ENST00000635924 64 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 ZNF72P-201ENST00000425869 1908 ntBASIC4.69□□□□□ -1.66
SPG7Q9UQ90 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPG7Q9UQ90 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 AC008669.1-201ENST00000565823 2178 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 RNY3P11-201ENST00000364153 102 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 MIR708-201ENST00000390708 88 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 SNORD17-201ENST00000390930 237 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 MTHFD2P2-201ENST00000407725 247 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 VDAC1P3-201ENST00000434069 851 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 CHEK2P4-201ENST00000450340 246 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 RPL31P13-201ENST00000484151 370 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 AC114801.2-201ENST00000503825 781 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 MRPS35P2-201ENST00000508242 191 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 AP000889.1-201ENST00000530968 660 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 AC124312.5-201ENST00000604451 268 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 U4.6-201ENST00000621618 127 ntBASIC4.68□□□□□ -1.66
SPG7Q9UQ90 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.68□□□□□ -1.66
SPG7Q9UQ90 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 SNORA31-201ENST00000362607 130 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 RNU4-42P-201ENST00000364738 142 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AC114482.1-201ENST00000418010 247 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AC098614.2-201ENST00000426040 255 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 NDUFB1P1-201ENST00000435191 180 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 snoU109.2-201ENST00000459316 135 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AC010655.3-201ENST00000478818 450 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 RN7SKP209-201ENST00000516888 304 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AP005902.1-201ENST00000521358 186 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AP004242.1-201ENST00000533701 349 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 U6.99-201ENST00000637524 83 ntBASIC4.67□□□□□ -1.66
SPG7Q9UQ90 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SPG7Q9UQ90 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms