Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LINC00933-203ENST00000559812 219 ntBASIC6.18□□□□□ -1.42
PHF8Q9UPP1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC6.18□□□□□ -1.42
PHF8Q9UPP1 MTND5P34-201ENST00000568888 325 ntBASIC6.18□□□□□ -1.42
PHF8Q9UPP1 MIR3158-1-201ENST00000583596 81 ntBASIC6.18□□□□□ -1.42
PHF8Q9UPP1 uc_338.13-201ENST00000618243 179 ntBASIC6.18□□□□□ -1.42
PHF8Q9UPP1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC6.18□□□□□ -1.42
PHF8Q9UPP1 MIR3674-201ENST00000636576 68 ntBASIC6.18□□□□□ -1.42
PHF8Q9UPP1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PHF8Q9UPP1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHF8Q9UPP1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHF8Q9UPP1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHF8Q9UPP1 AC134026.1-201ENST00000623249 2239 ntBASIC6.18□□□□□ -1.42
PHF8Q9UPP1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PHF8Q9UPP1 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHF8Q9UPP1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 RNU6-942P-201ENST00000363002 107 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 AL512633.1-201ENST00000399931 655 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 RNA5SP475-201ENST00000410568 110 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 FTH1P6-201ENST00000430768 320 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 RN7SL542P-201ENST00000467147 294 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 AC021231.3-201ENST00000558497 370 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 CYCSP39-201ENST00000565821 309 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 MIR6891-201ENST00000618788 93 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 MIR8059-201ENST00000620427 81 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 MIR6844-201ENST00000637122 62 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 AC107027.3-201ENST00000565095 3473 ntBASIC6.17□□□□□ -1.42
PHF8Q9UPP1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.17□□□□□ -1.42
PHF8Q9UPP1 MFSD8-242ENST00000641690 4199 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 RNU6-801P-201ENST00000364087 105 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 RNU6-1141P-201ENST00000364520 107 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 RNU6-1180P-201ENST00000364935 107 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 RNU6-643P-201ENST00000384018 107 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 RNU6-793P-201ENST00000384233 104 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 RN7SKP61-201ENST00000410642 295 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 RNU6-628P-201ENST00000410675 107 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 AL160275.2-201ENST00000412010 394 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 AL590383.1-201ENST00000428602 75 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 SNRPEP9-201ENST00000436794 238 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 MIR4444-1-201ENST00000581696 74 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 MIR4444-2-201ENST00000584390 74 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 AL391903.3-201ENST00000612158 163 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 AP001029.2-203ENST00000589795 4910 ntBASIC6.16□□□□□ -1.42
PHF8Q9UPP1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHF8Q9UPP1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PHF8Q9UPP1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PHF8Q9UPP1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
PHF8Q9UPP1 Y_RNA.287-201ENST00000364853 94 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 Y_RNA.293-201ENST00000364908 93 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 RNU6-407P-201ENST00000365280 104 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 UBBP2-201ENST00000376781 231 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.15□□□□□ -1.42
PHF8Q9UPP1 SNORA11F-201ENST00000408237 128 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 RN7SKP53-201ENST00000411337 315 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 EIF4A1P3-201ENST00000411521 244 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 AL121914.1-201ENST00000450188 156 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 MTATP6P7-201ENST00000453315 681 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 RNU6-1007P-201ENST00000516586 107 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 AC023632.4-201ENST00000517783 191 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC6.15□□□□□ -1.42
PHF8Q9UPP1 AC039056.2-201ENST00000622261 511 ntBASIC6.15□□□□□ -1.42
PHF8Q9UPP1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
PHF8Q9UPP1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.15□□□□□ -1.43
PHF8Q9UPP1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
PHF8Q9UPP1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.43
PHF8Q9UPP1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.15□□□□□ -1.43
PHF8Q9UPP1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PHF8Q9UPP1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PHF8Q9UPP1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PHF8Q9UPP1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PHF8Q9UPP1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PHF8Q9UPP1 RNU1-140P-201ENST00000365040 165 ntBASIC6.14□□□□□ -1.43
PHF8Q9UPP1 RNU6-245P-201ENST00000384020 107 ntBASIC6.14□□□□□ -1.43
PHF8Q9UPP1 Y_RNA.525-201ENST00000384570 113 ntBASIC6.14□□□□□ -1.43
PHF8Q9UPP1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms