Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MTCO2P8-201ENST00000412213 658 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 RPS15AP12-201ENST00000419498 388 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 RPL7P34-201ENST00000433316 712 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 CR769776.1-201ENST00000441254 787 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC012308.1-201ENST00000451232 178 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 SSXP1-201ENST00000453640 473 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 HMGB1P35-201ENST00000503360 598 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC117522.2-201ENST00000510049 657 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 RNU5B-3P-201ENST00000516601 115 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 RNU6-1092P-201ENST00000516955 87 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 CBX3P4-201ENST00000538909 354 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 PSMA3P-201ENST00000555485 635 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AL139022.2-201ENST00000606934 443 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 RNU6-946P-201ENST00000383878 107 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 RNU6-1032P-201ENST00000384100 107 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 RNU6-190P-201ENST00000384154 102 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 RNU6-809P-201ENST00000384461 107 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 MIR518D-201ENST00000385014 87 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 MIR561-201ENST00000385216 97 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 VN1R36P-201ENST00000414936 291 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 SSR1P2-201ENST00000415208 787 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC106883.1-201ENST00000418805 562 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AL591704.1-201ENST00000432574 275 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 HMGN2P3-201ENST00000433603 273 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 HMGN2P5-201ENST00000436882 273 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC104564.1-201ENST00000493028 407 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC109927.2-201ENST00000506416 303 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 RNU2-10P-201ENST00000516375 211 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 Y_RNA.689-201ENST00000516589 107 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 RNU6-1003P-201ENST00000517099 105 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AL157871.3-201ENST00000557231 293 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC026271.5-201ENST00000577873 130 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 MIR1273C-201ENST00000578669 77 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 AC096772.1-201ENST00000609146 564 ntBASIC1.66□□□□□ -2.14
TREX1Q9NSU2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TREX1Q9NSU2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
TREX1Q9NSU2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TREX1Q9NSU2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TREX1Q9NSU2 SNORD114-19-201ENST00000363072 75 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 RNU6-511P-201ENST00000363496 107 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 RNU6-660P-201ENST00000364566 109 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 RNU6-1200P-201ENST00000384162 107 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 RNU6-166P-201ENST00000384371 107 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 RNU6-482P-201ENST00000391068 107 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 MIR1289-2-201ENST00000408360 111 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AL008987.1-201ENST00000415528 237 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AL136380.1-201ENST00000447970 162 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.65□□□□□ -2.15
TREX1Q9NSU2 RNU5A-4P-201ENST00000516588 111 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AC107934.1-201ENST00000522215 217 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 MTND4LP18-201ENST00000526864 291 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AC090897.2-201ENST00000581715 130 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AP001004.1-201ENST00000582468 324 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 NDUFA8P1-201ENST00000605525 367 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AC018638.7-201ENST00000605836 1114 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 MIR15A-201ENST00000607334 83 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 RNU6-91P-201ENST00000607774 107 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AC092953.2-201ENST00000608000 699 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AC092106.3-201ENST00000611308 722 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AC008121.3-201ENST00000618726 433 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 AL031667.3-201ENST00000620124 655 ntBASIC1.65□□□□□ -2.15
TREX1Q9NSU2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.65□□□□□ -2.15
TREX1Q9NSU2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
TREX1Q9NSU2 SNORA25B-201ENST00000365507 128 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 AL627390.1-201ENST00000396055 340 ntBASIC1.64□□□□□ -2.15
TREX1Q9NSU2 POLHP1-201ENST00000411806 470 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms