Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
VCX3BQ9H321 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.15□□□□□ -2.23
VCX3BQ9H321 AC090517.3-201ENST00000625170 141 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 AC099654.8-201ENST00000637757 681 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 AP000560.1-201ENST00000624150 1937 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 RNU4-13P-201ENST00000364019 141 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 SNORA62.1-201ENST00000364287 154 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 SNORD14D-201ENST00000384390 87 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AL136310.1-201ENST00000404926 654 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 NEFMP1-201ENST00000443423 1006 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AL078601.1-201ENST00000444542 271 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 BTF3P15-201ENST00000455606 336 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 RPL39P36-201ENST00000490784 156 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 FAM92A1P2-202ENST00000504766 877 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 MTND4P2-201ENST00000507767 1203 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 RNU5B-3P-201ENST00000516601 115 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC091163.3-201ENST00000518269 1144 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC136619.2-201ENST00000563361 631 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 HSPE1P19-201ENST00000603327 295 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC007363.1-201ENST00000604736 620 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AL022345.1-201ENST00000607292 135 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.14□□□□□ -2.23
VCX3BQ9H321 AC006386.1-201ENST00000619436 415 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 AL138955.1-201ENST00000622881 1040 ntBASIC1.14□□□□□ -2.23
VCX3BQ9H321 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC138393.1-203ENST00000327086 343 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 RNU6-271P-201ENST00000363858 105 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 RNU6-60P-201ENST00000364792 103 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 SNORA40C-201ENST00000391285 128 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC119751.3-201ENST00000399720 670 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 SNORA3.2-201ENST00000408221 125 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC008267.5-201ENST00000424928 265 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 MTND5P25-201ENST00000430499 799 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 LARP1BP3-201ENST00000437229 869 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AL135790.2-201ENST00000437701 267 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC108059.3-201ENST00000456388 214 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 RPL30P7-201ENST00000479312 323 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 RPS3AP22-201ENST00000488297 769 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC116353.3-201ENST00000511215 249 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC010587.2-201ENST00000511727 448 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 MTND1P36-201ENST00000522384 936 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AP003033.1-201ENST00000527244 415 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AP000907.2-201ENST00000530827 353 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC093249.1-201ENST00000567049 203 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 BNIP3P9-201ENST00000603714 553 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 MTND3P19-201ENST00000603825 345 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 MIR6798-201ENST00000612887 67 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC064859.1-201ENST00000624741 174 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 AL512643.1-201ENST00000635735 524 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.13□□□□□ -2.23
VCX3BQ9H321 AC099786.3-201ENST00000565735 1410 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.13□□□□□ -2.23
VCX3BQ9H321 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 RNU1-58P-201ENST00000362413 163 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 RNU6-288P-201ENST00000363690 104 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 SNORD14B-201ENST00000364533 90 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 SNORD116.1-201ENST00000365628 92 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
VCX3BQ9H321 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 Y_RNA.465-201ENST00000384293 102 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 Y_RNA.534-201ENST00000384599 112 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 FTH1P15-201ENST00000406984 280 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 FCF1P10-201ENST00000407590 479 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 MIR1305-201ENST00000408300 86 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 RNA5SP100-201ENST00000410903 110 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 RNA5SP59-201ENST00000410922 110 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 RPS12P24-201ENST00000412619 387 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 MTND4P25-201ENST00000441039 533 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms