Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 RNU6-936P-201ENST00000384005 107 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 RNU6-480P-201ENST00000384332 107 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 Y_RNA.508-201ENST00000384502 114 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 AC060773.1-201ENST00000421698 310 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 RPL34P20-201ENST00000442771 351 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 AC233266.1-201ENST00000454518 96 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 RPS17P15-201ENST00000475609 349 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 RNU7-2P-201ENST00000516096 62 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 AC242852.1-201ENST00000612151 96 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 AL139099.4-201ENST00000614802 114 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 RN7SL544P-201ENST00000617232 284 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 RN7SL763P-201ENST00000620922 284 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 AC244015.1-201ENST00000622301 99 ntBASIC6.36□□□□□ -1.39
RNF39Q9H2S5 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
RNF39Q9H2S5 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 RNU6-1010P-201ENST00000362757 107 ntBASIC6.35□□□□□ -1.39
RNF39Q9H2S5 RNU6-442P-201ENST00000383968 104 ntBASIC6.35□□□□□ -1.39
RNF39Q9H2S5 Y_RNA.470-201ENST00000384307 117 ntBASIC6.35□□□□□ -1.39
RNF39Q9H2S5 AL133475.1-201ENST00000404414 305 ntBASIC6.35□□□□□ -1.39
RNF39Q9H2S5 AC074348.1-201ENST00000426503 132 ntBASIC6.35□□□□□ -1.39
RNF39Q9H2S5 RN7SL547P-201ENST00000490793 290 ntBASIC6.35□□□□□ -1.39
RNF39Q9H2S5 RNU6-1258P-201ENST00000516911 111 ntBASIC6.35□□□□□ -1.39
RNF39Q9H2S5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 AC010547.6-201ENST00000571789 193 ntBASIC6.35□□□□□ -1.39
RNF39Q9H2S5 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.35□□□□□ -1.39
RNF39Q9H2S5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 AC104964.3-201ENST00000606115 2860 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 SDHDP6-201ENST00000414693 480 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 AL356387.2-201ENST00000422272 243 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 SNORD4B-201ENST00000459083 72 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 RNU7-14P-201ENST00000459331 62 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 RN7SKP288-201ENST00000516227 268 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 MIR2117-201ENST00000516780 80 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 SNORA43.3-201ENST00000517240 103 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 AC022404.1-201ENST00000555320 273 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 MIR4301-201ENST00000577203 66 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 SMG1P7-201ENST00000565246 2704 ntBASIC6.34□□□□□ -1.39
RNF39Q9H2S5 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF39Q9H2S5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
RNF39Q9H2S5 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
RNF39Q9H2S5 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 AC009487.4-201ENST00000624969 3585 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 Y_RNA.264-201ENST00000364665 102 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 RNA5SP239-201ENST00000410218 129 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 RN7SKP167-201ENST00000411047 285 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 AC023141.8-201ENST00000442554 208 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 RNA5SP362-201ENST00000516048 118 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 IGLVIV-65-201ENST00000517313 360 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 AL162431.4-201ENST00000604674 411 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 MIR6768-201ENST00000610734 72 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 AL049767.1-202ENST00000637826 242 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 ZNF658B-201ENST00000602828 3408 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 AC002546.1-201ENST00000588041 2504 ntBASIC6.33□□□□□ -1.4
RNF39Q9H2S5 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms