Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.577-201ENST00000384794 101 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 MIR517A-201ENST00000385001 87 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 RNU6-817P-201ENST00000391083 104 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 MTHFD2P2-201ENST00000407725 247 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 RNU6-130P-201ENST00000411112 103 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AL691449.1-201ENST00000426570 421 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 HMGB1P27-201ENST00000431429 603 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AL031274.1-201ENST00000450334 232 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 FTH1P2-201ENST00000466086 412 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AC084198.1-201ENST00000477747 402 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AC098869.1-201ENST00000481627 292 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 RPL17P19-201ENST00000489069 552 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 RNU6-1282P-201ENST00000516735 96 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS11Q9H270 AP003730.1-201ENST00000524605 285 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 CASP1P1-201ENST00000526345 212 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS11Q9H270 TRAV28-201ENST00000557548 323 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS11Q9H270 AC006600.1-201ENST00000572529 153 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS11Q9H270 MIR5047-201ENST00000579212 100 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AC174048.1-201ENST00000603389 144 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AL137849.1-201ENST00000604767 169 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AL670379.4-201ENST00000605279 254 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS11Q9H270 AC007619.2-201ENST00000605743 379 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 MIR378J-201ENST00000611988 109 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 XIST_intron.1-201ENST00000619444 68 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 AC027309.3-201ENST00000623419 351 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS11Q9H270 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 HSPA8P4-201ENST00000511877 1920 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS11Q9H270 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS11Q9H270 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS11Q9H270 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
VPS11Q9H270 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS11Q9H270 AC138393.1-203ENST00000327086 343 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 RNA5SP130-201ENST00000364431 114 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 RPS4XP3-201ENST00000398541 413 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AL590704.1-201ENST00000402856 794 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 MIR548H3-201ENST00000408771 118 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 SYF2P2-201ENST00000417620 583 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 RPL7P2-201ENST00000427639 268 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AC092573.2-201ENST00000434546 243 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS11Q9H270 OR2AQ1P-201ENST00000451972 200 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS11Q9H270 SNORA40.15-201ENST00000516884 107 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AC109329.1-201ENST00000518744 317 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS11Q9H270 MIR4284-201ENST00000578924 81 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS11Q9H270 AC010620.2-201ENST00000600135 313 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AL138889.2-201ENST00000603883 242 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 ELOCP5-201ENST00000604924 333 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AL359547.2-201ENST00000615810 418 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 MIR6076-201ENST00000617521 113 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AL138825.1-201ENST00000618587 192 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AL445567.2-201ENST00000618935 498 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 AL159153.1-201ENST00000619688 317 ntBASIC3.84□□□□□ -1.79
VPS11Q9H270 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS11Q9H270 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS11Q9H270 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS11Q9H270 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VPS11Q9H270 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS11Q9H270 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VPS11Q9H270 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
VPS11Q9H270 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS11Q9H270 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS11Q9H270 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS11Q9H270 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS11Q9H270 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS11Q9H270 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS11Q9H270 Y_RNA.48-201ENST00000362710 103 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 RNU6-434P-201ENST00000384376 107 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 SNORA51.11-201ENST00000384442 131 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 RNU6-14P-201ENST00000384630 106 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 RPS4XP7-201ENST00000406274 780 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 RNU6-1203P-201ENST00000410703 110 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 AL139156.1-201ENST00000412785 841 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 EIF1P2-201ENST00000428233 350 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 AC004383.1-201ENST00000438135 289 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 Z82210.1-201ENST00000440037 231 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 AC098831.1-201ENST00000440661 216 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 RPS29P31-201ENST00000446147 164 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 NUTF2P3-201ENST00000448540 384 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 AC013470.1-201ENST00000453438 462 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 RNU6-953P-201ENST00000459154 107 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 RPL21P11-201ENST00000461458 483 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 AC011005.2-201ENST00000487324 359 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 AL160314.1-201ENST00000490836 438 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 RN7SKP60-201ENST00000516985 239 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS11Q9H270 AC073410.2-201ENST00000603240 332 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS11Q9H270 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS11Q9H270 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms