Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 RN7SL722P-201ENST00000617780 284 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 RN7SL565P-201ENST00000618246 284 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 AP000346.3-201ENST00000622821 210 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 SNORD115-32-201ENST00000364079 82 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-151P-201ENST00000364158 107 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-968P-201ENST00000384076 107 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 AC119751.6-201ENST00000416712 186 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 SEPT7P4-201ENST00000437076 306 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 HSPE1P6-201ENST00000479457 291 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 RPS4XP22-201ENST00000480755 780 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 AC010265.1-201ENST00000513509 211 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 SNORA40.9-201ENST00000515895 93 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-1333P-201ENST00000516162 93 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 RN7SKP49-201ENST00000516675 260 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 AC022968.1-201ENST00000567372 442 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 AC002545.1-201ENST00000592511 181 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 AC023043.4-201ENST00000612081 449 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 AC006001.4-201ENST00000622243 395 ntBASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.84□□□□□ -1.63
NUCKS1Q9H1E3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NUCKS1Q9H1E3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.84□□□□□ -1.64
NUCKS1Q9H1E3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.84□□□□□ -1.64
NUCKS1Q9H1E3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
NUCKS1Q9H1E3 AC010332.2-201ENST00000613083 1904 ntBASIC4.84□□□□□ -1.64
NUCKS1Q9H1E3 AC009812.4-201ENST00000569134 1805 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 OR4G2P-202ENST00000641004 1759 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 MARK2P15-201ENST00000432204 2186 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AC021146.4-201ENST00000309229 279 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.23-201ENST00000362496 106 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 RNU6-961P-201ENST00000363893 105 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.331-201ENST00000365267 102 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.412-201ENST00000384001 104 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 SNORA70F-201ENST00000384142 135 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AL357075.1-201ENST00000404107 726 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 MIR1183-201ENST00000408856 89 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 COX6B1P7-201ENST00000430845 235 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 CR769767.1-201ENST00000436337 346 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AC096638.1-201ENST00000444678 216 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AL359073.1-201ENST00000448036 403 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AL353705.4-201ENST00000449661 238 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AL451050.1-201ENST00000450126 415 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 NUTF2P7-201ENST00000453086 375 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 FABP5P15-201ENST00000453566 214 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AC005840.1-201ENST00000498412 377 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 MIR4782-201ENST00000577987 79 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 MIR3684-201ENST00000579779 74 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AL645944.1-201ENST00000603857 493 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 U4.7-201ENST00000638126 106 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 AC009541.1-201ENST00000438279 2662 ntBASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUCKS1Q9H1E3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 SAGE2P-201ENST00000420011 2126 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 AC116096.1-201ENST00000566804 2314 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.230-201ENST00000364348 109 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 RNU5E-7P-201ENST00000365290 117 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.357-201ENST00000365487 109 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 RNU6-211P-201ENST00000384047 107 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 SNORA40-201ENST00000388090 126 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 RNA5SP332-201ENST00000391063 115 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 RPL23AP24-201ENST00000458203 385 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 RN7SL459P-201ENST00000481078 302 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 YWHAEP4-201ENST00000505390 198 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 RNU6-971P-201ENST00000516920 106 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 RN7SKP234-201ENST00000517173 224 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 IGLV3-26-201ENST00000520756 302 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 AC069240.1-201ENST00000548774 375 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUCKS1Q9H1E3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms