Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RAP1BP3-201ENST00000407180 549 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 MTCO3P41-201ENST00000414801 328 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 RPS3AP44-201ENST00000425466 790 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 AL606489.2-201ENST00000433886 234 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 RPL23AP83-201ENST00000434984 473 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC073415.1-201ENST00000449240 153 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC012308.1-201ENST00000451232 178 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 SCARNA18-201ENST00000459004 134 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AP000852.1-201ENST00000472460 573 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 RPL9P6-201ENST00000492764 598 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 RPL37P25-201ENST00000507308 276 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 LRRC34P2-201ENST00000514850 553 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 AP005902.1-201ENST00000521358 186 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 HIF1AP1-201ENST00000553642 175 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 ZNF861P-201ENST00000588126 639 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC060766.3-201ENST00000591442 263 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC007179.3-201ENST00000604976 235 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC017083.3-201ENST00000609955 700 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC096577.2-201ENST00000611455 153 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC026585.1-201ENST00000619582 524 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC024581.2-201ENST00000619986 252 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AL031601.2-202ENST00000622650 282 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC244517.12-201ENST00000623581 663 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 FO624990.1-201ENST00000636373 85 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AL355596.1-201ENST00000565399 3996 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC096644.4-201ENST00000563417 2912 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RAB40CQ96S21 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 AC006020.1-201ENST00000420179 1854 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC138393.1-203ENST00000327086 343 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 SNORA71.1-201ENST00000364523 117 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 RNU6-1303P-201ENST00000364841 107 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 Y_RNA.409-201ENST00000383990 98 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 RNU6-434P-201ENST00000384376 107 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 MIR23A-201ENST00000385245 73 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 SNORD70.1-201ENST00000391007 85 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 CYCSP33-201ENST00000414485 327 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 CYCSP48-201ENST00000417124 323 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 VN1R108P-201ENST00000431580 830 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 PRPS1P1-201ENST00000445305 876 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 CACYBPP2-201ENST00000453625 678 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL139109.1-201ENST00000455491 297 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC006026.2-201ENST00000457376 180 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL163973.1-201ENST00000484753 577 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 RPL36AP48-201ENST00000485521 314 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC018437.1-201ENST00000492214 406 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 TBCAP3-201ENST00000512475 312 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 SNORA40.12-201ENST00000516329 111 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 RNU5B-3P-201ENST00000516601 115 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL137161.1-201ENST00000532231 390 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC245505.1-201ENST00000556398 224 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 BNIP3P30-201ENST00000601184 574 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL356575.1-201ENST00000603008 283 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AP001330.5-201ENST00000607176 411 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC022418.1-201ENST00000624118 445 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 AC124864.2-201ENST00000624736 186 ntBASIC2.26□□□□□ -2.05
RAB40CQ96S21 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
RAB40CQ96S21 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RAB40CQ96S21 AL354685.2-201ENST00000448218 1447 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.25□□□□□ -2.05
RAB40CQ96S21 RNA5SP387-201ENST00000364226 106 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 Y_RNA.255-201ENST00000364581 97 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 SNORA70.4-201ENST00000365509 134 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 DEFA7P-201ENST00000382676 285 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 SNORD116-20-201ENST00000384529 92 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 MIR524-201ENST00000385242 87 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 SNORA16.2-201ENST00000390991 127 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 MTCO3P40-201ENST00000392516 676 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 BTF3P7-201ENST00000407097 488 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 MORF4L1P6-201ENST00000418771 268 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 AC003685.2-201ENST00000422795 395 ntBASIC2.25□□□□□ -2.05
RAB40CQ96S21 RPL7P54-201ENST00000438336 674 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms