Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC136Q96JN2 AC022418.1-201ENST00000624118 445 ntBASIC3.62□□□□□ -1.83
CCDC136Q96JN2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CCDC136Q96JN2 AL355596.1-201ENST00000565399 3996 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 RNU6-942P-201ENST00000363002 107 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 RNU6-1090P-201ENST00000364065 94 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 SET-203ENST00000372688 801 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 RNU6-434P-201ENST00000384376 107 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 TIMM9P3-201ENST00000428659 274 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 RPS15AP7-201ENST00000439294 405 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AL671855.1-201ENST00000446875 1203 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AC082651.2-201ENST00000496833 166 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 LRRC34P2-201ENST00000514850 553 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 RNU6-1038P-201ENST00000516516 104 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 HPRT1P3-201ENST00000539521 576 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 MIR5004-201ENST00000579078 107 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 MIR3670-2-201ENST00000582974 65 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 MIR3605-201ENST00000583214 100 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 MIR3670-1-201ENST00000584160 65 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 MIR3670-3-201ENST00000584855 65 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 MIR4424-201ENST00000585257 86 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AC002044.1-201ENST00000606707 158 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 MIR3670-4-201ENST00000612260 65 ntBASIC3.61□□□□□ -1.83
CCDC136Q96JN2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC136Q96JN2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 RNU4-20P-201ENST00000365601 151 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 RNU6-648P-201ENST00000410190 107 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 SNORA25.11-201ENST00000515935 105 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 RNU6-1281P-201ENST00000516223 105 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 SNORA31.18-201ENST00000517043 134 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 MTND4P7-201ENST00000523876 130 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 AP004607.1-201ENST00000524456 203 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 OR5AQ1P-201ENST00000527596 927 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 AC068790.6-201ENST00000602558 258 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 AC026585.1-201ENST00000619582 524 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 AC098679.4-201ENST00000624241 654 ntBASIC3.6□□□□□ -1.83
CCDC136Q96JN2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC136Q96JN2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 RNU6-461P-201ENST00000364195 107 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 Y_RNA.324-201ENST00000365165 102 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 RNU6-1068P-201ENST00000410958 103 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 TOMM20P4-201ENST00000427861 435 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 Z98742.2-201ENST00000431564 187 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 RN7SKP57-201ENST00000517248 293 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 COX6CP5-201ENST00000527162 228 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC136Q96JN2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.59□□□□□ -1.83
CCDC136Q96JN2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CCDC136Q96JN2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.59□□□□□ -1.84
CCDC136Q96JN2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 RNA5SP374-201ENST00000362939 125 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 RNU6-748P-201ENST00000384648 107 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 SNORA11.1-201ENST00000408133 129 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 MTND3P21-201ENST00000433774 331 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AL121601.2-201ENST00000438019 707 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 RPS3AP12-201ENST00000443616 753 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms