Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC110768.1-201ENST00000509222 400 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 RNU6-612P-201ENST00000516909 102 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 AC005476.1-201ENST00000554427 397 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 AC004584.2-201ENST00000570407 410 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 MIR3690-201ENST00000580266 75 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 VN1R107P-201ENST00000601784 209 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 AC012468.1-201ENST00000604888 430 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 AL021879.1-201ENST00000611756 288 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 U4.7-201ENST00000638126 106 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 AC066616.2-201ENST00000559334 1481 ntBASIC3.85□□□□□ -1.79
SH3RF2Q8TEC5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 RNU4-42P-201ENST00000364738 142 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 SNORA63.7-201ENST00000365579 123 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 AL133412.1-201ENST00000380194 2992 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 RNU6-217P-201ENST00000384164 104 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 Y_RNA.485-201ENST00000384395 102 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 Y_RNA.533-201ENST00000384596 114 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 MIR183-201ENST00000384958 110 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 MIR218-2-201ENST00000385006 110 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 MIR325-201ENST00000385260 98 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 MT-TG-201ENST00000387429 68 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 RNA5SP424-201ENST00000390988 115 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 RN7SKP177-201ENST00000410567 355 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 AC114482.1-201ENST00000418010 247 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 RN7SL293P-201ENST00000481765 281 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 MTND4LP22-201ENST00000508209 276 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 RNU6-703P-201ENST00000516946 107 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 OR5D17P-201ENST00000531492 978 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 AC110588.1-201ENST00000559699 137 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 VN1R91P-201ENST00000594377 169 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 FTX_3.1-201ENST00000610451 147 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 HMGB1P24-202ENST00000615653 685 ntBASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3RF2Q8TEC5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SH3RF2Q8TEC5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SH3RF2Q8TEC5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.84□□□□□ -1.8
SH3RF2Q8TEC5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SH3RF2Q8TEC5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-595P-201ENST00000363944 107 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 SET-203ENST00000372688 801 ntTSL 2 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 DEFB109C-201ENST00000382575 264 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 DEFB109B-201ENST00000382656 264 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-72P-201ENST00000384285 79 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-1109P-201ENST00000391187 107 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 RPL23AP48-201ENST00000406913 488 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 MIR1252-201ENST00000408861 65 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 BTF3L4P4-201ENST00000506381 449 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AC009812.2-201ENST00000517657 457 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AC090281.1-201ENST00000523019 276 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 HMGB1P14-201ENST00000557424 591 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 LINC00933-203ENST00000559812 219 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AC008962.1-201ENST00000605729 304 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AC005046.1-201ENST00000608515 625 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 U6.105-201ENST00000637379 88 ntBASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3RF2Q8TEC5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 FTLP6-201ENST00000355274 422 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-227P-201ENST00000362865 103 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-238P-201ENST00000363313 106 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 RNU6-450P-201ENST00000364654 107 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 SAR1AP2-201ENST00000392696 594 ntBASIC3.82□□□□□ -1.8
SH3RF2Q8TEC5 RPS29P13-201ENST00000402041 169 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms