Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 FAM35BP-202ENST00000497389 3337 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 FAM35CP-201ENST00000554755 2470 ntBASIC3.21□□□□□ -1.89
PTCHD4Q6ZW05 AC007823.1-201ENST00000569932 1566 ntBASIC3.21□□□□□ -1.89
PTCHD4Q6ZW05 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-778P-201ENST00000363269 103 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-884P-201ENST00000363889 107 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 Y_RNA.395-201ENST00000383945 109 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-1027P-201ENST00000383998 107 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-890P-201ENST00000384121 107 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-325P-201ENST00000411132 105 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RNA5SP31-201ENST00000411144 127 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 HMGN2P30-201ENST00000423237 256 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AP000907.1-201ENST00000428428 510 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC004975.1-201ENST00000428733 208 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AL159987.2-201ENST00000432754 307 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 NUTF2P7-201ENST00000453086 375 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RN7SL594P-201ENST00000470590 287 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RPL32P34-201ENST00000486380 400 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC006445.2-201ENST00000510061 472 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC026402.1-201ENST00000513642 170 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 Y_RNA.687-201ENST00000516558 91 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RN7SKP282-201ENST00000516824 299 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 MIR2276-201ENST00000516886 89 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-1183P-201ENST00000517054 60 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 ELOCP31-201ENST00000540463 467 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC136624.4-201ENST00000573044 370 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC011494.1-201ENST00000596454 237 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AC005034.5-201ENST00000604219 466 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 AL138880.2-201ENST00000616214 239 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCHD4Q6ZW05 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 Y_RNA.2-201ENST00000362330 96 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-799P-201ENST00000363567 107 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 Y_RNA.162-201ENST00000363683 102 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-270P-201ENST00000364131 105 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 RNU1-64P-201ENST00000365443 163 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-827P-201ENST00000365553 106 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 Z98749.2-208ENST00000381646 500 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 RNU1-73P-201ENST00000383971 164 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-1035P-201ENST00000384477 107 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-790P-201ENST00000384479 105 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-308P-201ENST00000390957 107 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 SYF2P2-201ENST00000417620 583 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 FTH1P25-201ENST00000447665 469 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 MTATP6P7-201ENST00000453315 681 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 AL031183.1-201ENST00000457667 207 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 RPL23AP67-201ENST00000465341 474 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 AC107934.2-201ENST00000518653 310 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 AMZ2P1-203ENST00000565833 850 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 AC078795.3-201ENST00000602913 472 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 AP000787.2-201ENST00000604432 568 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 uc_338.22-201ENST00000622722 187 ntBASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCHD4Q6ZW05 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 Y_RNA.31-201ENST00000362574 102 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RN7SKP227-201ENST00000364445 330 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 SNORA73.2-201ENST00000364946 201 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-1040P-201ENST00000383974 107 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-842P-201ENST00000384269 107 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-72P-201ENST00000384285 79 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 U8.11-201ENST00000384699 133 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 U8.12-201ENST00000384701 133 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-331P-201ENST00000384724 107 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-1106P-201ENST00000390845 107 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 MIR888-201ENST00000401186 77 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 Y_RNA.625-201ENST00000411256 107 ntBASIC3.19□□□□□ -1.9
PTCHD4Q6ZW05 RPL26P27-201ENST00000414397 437 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms