Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CYCSP26-201ENST00000534107 320 ntBASIC4.57□□□□□ -1.68
RNF144AP50876 AC005255.1-201ENST00000593748 216 ntBASIC4.57□□□□□ -1.68
RNF144AP50876 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.57□□□□□ -1.68
RNF144AP50876 MIR6129-201ENST00000616087 109 ntBASIC4.57□□□□□ -1.68
RNF144AP50876 AC013791.1-201ENST00000616619 62 ntBASIC4.57□□□□□ -1.68
RNF144AP50876 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.57□□□□□ -1.68
RNF144AP50876 AL022401.1-201ENST00000619498 108 ntBASIC4.57□□□□□ -1.68
RNF144AP50876 AC019206.1-201ENST00000621938 425 ntBASIC4.57□□□□□ -1.68
RNF144AP50876 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.57□□□□□ -1.68
RNF144AP50876 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF144AP50876 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF144AP50876 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
RNF144AP50876 TLK1P1-201ENST00000456760 2440 ntBASIC4.57□□□□□ -1.68
RNF144AP50876 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF144AP50876 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF144AP50876 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF144AP50876 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF144AP50876 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF144AP50876 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
RNF144AP50876 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF144AP50876 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF144AP50876 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RNF144AP50876 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF144AP50876 SNORA73.1-201ENST00000363107 205 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 RNU6-727P-201ENST00000363592 107 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 MIR325-201ENST00000385260 98 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 MIR549A-201ENST00000385268 96 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 U3.40-201ENST00000408706 208 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 AL160275.2-201ENST00000412010 394 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 RPS26P42-201ENST00000413485 326 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 AC096649.2-201ENST00000416186 393 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 BPY2DP-201ENST00000422208 265 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 AL354714.3-201ENST00000447284 493 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 AC125238.1-201ENST00000448842 249 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 RNU7-197P-201ENST00000458836 62 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 RPS17P2-201ENST00000461663 408 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 RPL21P126-201ENST00000470049 478 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 COX6B1P5-201ENST00000509843 249 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF144AP50876 RN7SKP179-201ENST00000516126 217 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 RNA5SP76-201ENST00000516277 87 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 AC136628.3-201ENST00000521868 290 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF144AP50876 AC127455.1-201ENST00000565496 145 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF144AP50876 RNA5SP108-201ENST00000605921 117 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 AL021997.2-201ENST00000615674 271 ntBASIC4.56□□□□□ -1.68
RNF144AP50876 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF144AP50876 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF144AP50876 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF144AP50876 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF144AP50876 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
RNF144AP50876 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF144AP50876 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF144AP50876 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF144AP50876 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF144AP50876 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF144AP50876 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF144AP50876 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RNF144AP50876 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF144AP50876 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF144AP50876 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF144AP50876 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF144AP50876 RNU1-100P-201ENST00000365255 165 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 RNU6-476P-201ENST00000384726 107 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 MIR105-2-201ENST00000385083 81 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 MIR708-201ENST00000390708 88 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 RNU6-460P-201ENST00000391158 108 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF144AP50876 snoU13.24-201ENST00000458998 104 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 RN7SL319P-201ENST00000480656 221 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 RN7SL244P-201ENST00000493405 297 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 AC006499.6-201ENST00000511169 607 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 ENPP7P9-201ENST00000514456 627 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 SNORA31.8-201ENST00000516327 108 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 RNU6-1007P-201ENST00000516586 107 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 RNU2-56P-201ENST00000516826 190 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF144AP50876 LARP7P3-201ENST00000579888 337 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 IPO5P1-202ENST00000600039 287 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 MIR6719-201ENST00000622428 87 ntBASIC4.55□□□□□ -1.68
RNF144AP50876 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF144AP50876 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RNF144AP50876 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF144AP50876 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF144AP50876 Y_RNA.24-201ENST00000362508 103 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 RNU6-335P-201ENST00000364563 113 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 RNU6-245P-201ENST00000384020 107 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 MIR765-201ENST00000390226 114 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 SNORA26.5-201ENST00000391215 123 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 MIR888-201ENST00000401186 77 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF144AP50876 AC092047.1-201ENST00000424997 240 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 HMGB1P37-201ENST00000439613 609 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms