Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR625-201ENST00000385047 85 ntBASIC4.77□□□□□ -1.65
RXRBP28702 AL603910.2-201ENST00000407268 136 ntBASIC4.77□□□□□ -1.65
RXRBP28702 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.77□□□□□ -1.65
RXRBP28702 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.77□□□□□ -1.65
RXRBP28702 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.77□□□□□ -1.65
RXRBP28702 AC069499.1-201ENST00000489433 509 ntBASIC4.77□□□□□ -1.65
RXRBP28702 MTND3P25-201ENST00000509243 135 ntBASIC4.77□□□□□ -1.65
RXRBP28702 RNU6-911P-201ENST00000516523 104 ntBASIC4.77□□□□□ -1.65
RXRBP28702 RNU6-677P-201ENST00000516914 101 ntBASIC4.77□□□□□ -1.65
RXRBP28702 AL121603.1-201ENST00000553815 142 ntBASIC4.77□□□□□ -1.65
RXRBP28702 MIR5701-3-201ENST00000578890 82 ntBASIC4.77□□□□□ -1.65
RXRBP28702 MIR5701-1-201ENST00000585138 82 ntBASIC4.77□□□□□ -1.65
RXRBP28702 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.77□□□□□ -1.65
RXRBP28702 AC012669.1-201ENST00000603209 283 ntBASIC4.77□□□□□ -1.65
RXRBP28702 AL034351.1-201ENST00000605288 668 ntBASIC4.77□□□□□ -1.65
RXRBP28702 AC073657.2-201ENST00000605661 303 ntBASIC4.77□□□□□ -1.65
RXRBP28702 MIR5701-2-201ENST00000615634 82 ntBASIC4.77□□□□□ -1.65
RXRBP28702 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.77□□□□□ -1.65
RXRBP28702 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.77□□□□□ -1.65
RXRBP28702 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.77□□□□□ -1.65
RXRBP28702 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RXRBP28702 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RXRBP28702 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.77□□□□□ -1.65
RXRBP28702 AP000560.1-201ENST00000624150 1937 ntBASIC4.77□□□□□ -1.65
RXRBP28702 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RXRBP28702 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RXRBP28702 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.76□□□□□ -1.65
RXRBP28702 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RXRBP28702 SNORA54-201ENST00000384281 123 ntBASIC4.76□□□□□ -1.65
RXRBP28702 RNA5SP424-201ENST00000390988 115 ntBASIC4.76□□□□□ -1.65
RXRBP28702 SAR1AP2-201ENST00000392696 594 ntBASIC4.76□□□□□ -1.65
RXRBP28702 RNU6-325P-201ENST00000411132 105 ntBASIC4.76□□□□□ -1.65
RXRBP28702 CYCSP33-201ENST00000414485 327 ntBASIC4.76□□□□□ -1.65
RXRBP28702 RPL21P90-201ENST00000415692 466 ntBASIC4.76□□□□□ -1.65
RXRBP28702 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RXRBP28702 U3.44-201ENST00000458938 192 ntBASIC4.76□□□□□ -1.65
RXRBP28702 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.76□□□□□ -1.65
RXRBP28702 AC006445.1-201ENST00000491925 405 ntBASIC4.76□□□□□ -1.65
RXRBP28702 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.76□□□□□ -1.65
RXRBP28702 AC005798.1-201ENST00000513715 387 ntBASIC4.76□□□□□ -1.65
RXRBP28702 SNORA31.3-201ENST00000516029 96 ntBASIC4.76□□□□□ -1.65
RXRBP28702 Y_RNA.703-201ENST00000516846 111 ntBASIC4.76□□□□□ -1.65
RXRBP28702 AC004024.1-201ENST00000549244 247 ntBASIC4.76□□□□□ -1.65
RXRBP28702 AL161713.1-201ENST00000555538 145 ntBASIC4.76□□□□□ -1.65
RXRBP28702 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.76□□□□□ -1.65
RXRBP28702 AC004584.2-201ENST00000570407 410 ntBASIC4.76□□□□□ -1.65
RXRBP28702 CPDP1-201ENST00000579660 283 ntBASIC4.76□□□□□ -1.65
RXRBP28702 MIR4769-201ENST00000584126 77 ntBASIC4.76□□□□□ -1.65
RXRBP28702 AL713866.2-201ENST00000603579 219 ntBASIC4.76□□□□□ -1.65
RXRBP28702 AL031601.2-202ENST00000622650 282 ntBASIC4.76□□□□□ -1.65
RXRBP28702 AL450472.1-202ENST00000637286 180 ntBASIC4.76□□□□□ -1.65
RXRBP28702 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.76□□□□□ -1.65
RXRBP28702 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RXRBP28702 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.76□□□□□ -1.65
RXRBP28702 SCN1A-220ENST00000641603 12506 ntBASIC4.75□□□□□ -1.65
RXRBP28702 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
RXRBP28702 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RXRBP28702 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.75□□□□□ -1.65
RXRBP28702 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RXRBP28702 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RXRBP28702 MIR448-201ENST00000362131 111 ntBASIC4.75□□□□□ -1.65
RXRBP28702 RNU6-545P-201ENST00000362681 104 ntBASIC4.75□□□□□ -1.65
RXRBP28702 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RXRBP28702 Y_RNA.506-201ENST00000384494 102 ntBASIC4.75□□□□□ -1.65
RXRBP28702 Y_RNA.533-201ENST00000384596 114 ntBASIC4.75□□□□□ -1.65
RXRBP28702 MIR578-201ENST00000384828 96 ntBASIC4.75□□□□□ -1.65
RXRBP28702 AC099677.1-201ENST00000420575 175 ntBASIC4.75□□□□□ -1.65
RXRBP28702 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.75□□□□□ -1.65
RXRBP28702 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.75□□□□□ -1.65
RXRBP28702 IFNWP4-201ENST00000453148 294 ntBASIC4.75□□□□□ -1.65
RXRBP28702 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.75□□□□□ -1.65
RXRBP28702 IGKV2-26-201ENST00000518305 343 ntBASIC4.75□□□□□ -1.65
RXRBP28702 AC144568.1-201ENST00000520139 137 ntBASIC4.75□□□□□ -1.65
RXRBP28702 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.75□□□□□ -1.65
RXRBP28702 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.75□□□□□ -1.65
RXRBP28702 TRAV32-201ENST00000553993 340 ntBASIC4.75□□□□□ -1.65
RXRBP28702 AL355877.2-201ENST00000603670 358 ntBASIC4.75□□□□□ -1.65
RXRBP28702 MIR15A-201ENST00000607334 83 ntBASIC4.75□□□□□ -1.65
RXRBP28702 MIR6130-201ENST00000619419 109 ntBASIC4.75□□□□□ -1.65
RXRBP28702 AC132825.6-201ENST00000638861 357 ntBASIC4.75□□□□□ -1.65
RXRBP28702 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
RXRBP28702 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.75□□□□□ -1.65
RXRBP28702 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.75□□□□□ -1.65
RXRBP28702 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RXRBP28702 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RXRBP28702 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RXRBP28702 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RXRBP28702 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RXRBP28702 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RXRBP28702 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RXRBP28702 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RXRBP28702 AL391987.6-201ENST00000305671 199 ntBASIC4.74□□□□□ -1.65
RXRBP28702 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.74□□□□□ -1.65
RXRBP28702 RNA5SP52-201ENST00000362448 134 ntBASIC4.74□□□□□ -1.65
RXRBP28702 Y_RNA.65-201ENST00000362846 100 ntBASIC4.74□□□□□ -1.65
RXRBP28702 RNU6-288P-201ENST00000363690 104 ntBASIC4.74□□□□□ -1.65
RXRBP28702 Y_RNA.269-201ENST00000364685 89 ntBASIC4.74□□□□□ -1.65
RXRBP28702 Y_RNA.352-201ENST00000365439 102 ntBASIC4.74□□□□□ -1.65
RXRBP28702 RNU6-790P-201ENST00000384479 105 ntBASIC4.74□□□□□ -1.65
RXRBP28702 MIR135A2-201ENST00000384854 100 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 885.1 ms