Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL021997.2-201ENST00000615674 271 ntBASIC5.91□□□□□ -1.46
CD44P16070 AC100827.5-201ENST00000615883 426 ntBASIC5.91□□□□□ -1.46
CD44P16070 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CD44P16070 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.91□□□□□ -1.46
CD44P16070 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CD44P16070 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CD44P16070 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.91□□□□□ -1.46
CD44P16070 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.91□□□□□ -1.46
CD44P16070 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CD44P16070 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CD44P16070 AC118273.1-201ENST00000525324 3006 ntBASIC5.91□□□□□ -1.46
CD44P16070 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CD44P16070 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
CD44P16070 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CD44P16070 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CD44P16070 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
CD44P16070 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CD44P16070 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CD44P16070 RNU6-832P-201ENST00000363319 107 ntBASIC5.9□□□□□ -1.46
CD44P16070 RNU6-944P-201ENST00000364023 107 ntBASIC5.9□□□□□ -1.46
CD44P16070 RNU6-690P-201ENST00000365242 106 ntBASIC5.9□□□□□ -1.46
CD44P16070 RNU6-1104P-201ENST00000384723 104 ntBASIC5.9□□□□□ -1.46
CD44P16070 RN7SKP16-201ENST00000410180 299 ntBASIC5.9□□□□□ -1.46
CD44P16070 RNU2-50P-201ENST00000410494 143 ntBASIC5.9□□□□□ -1.46
CD44P16070 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.9□□□□□ -1.46
CD44P16070 CYCSP51-201ENST00000443545 318 ntBASIC5.9□□□□□ -1.46
CD44P16070 AP000281.1-201ENST00000444036 316 ntBASIC5.9□□□□□ -1.46
CD44P16070 AC125388.1-201ENST00000459631 156 ntBASIC5.9□□□□□ -1.46
CD44P16070 RPL27AP5-201ENST00000469428 449 ntBASIC5.9□□□□□ -1.46
CD44P16070 SCARNA16.4-201ENST00000516956 187 ntBASIC5.9□□□□□ -1.46
CD44P16070 MIR4505-201ENST00000582238 73 ntBASIC5.9□□□□□ -1.46
CD44P16070 AL162431.4-201ENST00000604674 411 ntBASIC5.9□□□□□ -1.46
CD44P16070 MIR1910-201ENST00000636955 80 ntBASIC5.9□□□□□ -1.46
CD44P16070 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CD44P16070 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.9□□□□□ -1.47
CD44P16070 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CD44P16070 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD44P16070 NOL8P1-201ENST00000508336 3529 ntBASIC5.89□□□□□ -1.47
CD44P16070 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD44P16070 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD44P16070 RNU1-19P-201ENST00000363306 165 ntBASIC5.89□□□□□ -1.47
CD44P16070 Y_RNA.203-201ENST00000364106 102 ntBASIC5.89□□□□□ -1.47
CD44P16070 RN7SKP81-201ENST00000365603 331 ntBASIC5.89□□□□□ -1.47
CD44P16070 RNA5SP284-201ENST00000384547 118 ntBASIC5.89□□□□□ -1.47
CD44P16070 AC245291.1-201ENST00000419501 328 ntBASIC5.89□□□□□ -1.47
CD44P16070 RNA5SP373-201ENST00000517271 95 ntBASIC5.89□□□□□ -1.47
CD44P16070 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC5.89□□□□□ -1.47
CD44P16070 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC5.89□□□□□ -1.47
CD44P16070 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.89□□□□□ -1.47
CD44P16070 AC021443.1-201ENST00000604478 211 ntBASIC5.89□□□□□ -1.47
CD44P16070 PCGEM1.1-201ENST00000613431 131 ntBASIC5.89□□□□□ -1.47
CD44P16070 AC109583.2-201ENST00000617367 129 ntBASIC5.89□□□□□ -1.47
CD44P16070 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.89□□□□□ -1.47
CD44P16070 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.89□□□□□ -1.47
CD44P16070 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CD44P16070 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CD44P16070 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD44P16070 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CD44P16070 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
CD44P16070 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CD44P16070 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CD44P16070 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CD44P16070 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CD44P16070 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CD44P16070 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CD44P16070 SMG1P7-201ENST00000565246 2704 ntBASIC5.88□□□□□ -1.47
CD44P16070 AC004817.4-201ENST00000602396 3625 ntBASIC5.88□□□□□ -1.47
CD44P16070 SNORA27.1-201ENST00000362604 124 ntBASIC5.88□□□□□ -1.47
CD44P16070 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CD44P16070 MIR577-201ENST00000385196 96 ntBASIC5.88□□□□□ -1.47
CD44P16070 RN7SKP27-201ENST00000410684 333 ntBASIC5.88□□□□□ -1.47
CD44P16070 RPL23AP46-201ENST00000438548 490 ntBASIC5.88□□□□□ -1.47
CD44P16070 RPL23AP52-201ENST00000439311 478 ntBASIC5.88□□□□□ -1.47
CD44P16070 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC5.88□□□□□ -1.47
CD44P16070 AIG1P1-201ENST00000503376 148 ntBASIC5.88□□□□□ -1.47
CD44P16070 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.88□□□□□ -1.47
CD44P16070 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.88□□□□□ -1.47
CD44P16070 AC009163.5-201ENST00000575421 637 ntBASIC5.88□□□□□ -1.47
CD44P16070 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CD44P16070 AP005432.2-201ENST00000608162 586 ntBASIC5.88□□□□□ -1.47
CD44P16070 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC5.88□□□□□ -1.47
CD44P16070 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CD44P16070 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.88□□□□□ -1.47
CD44P16070 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CD44P16070 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CD44P16070 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CD44P16070 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CD44P16070 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CD44P16070 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.87□□□□□ -1.47
CD44P16070 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CD44P16070 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 RNU6-509P-201ENST00000363519 107 ntBASIC5.87□□□□□ -1.47
CD44P16070 Y_RNA.191-201ENST00000363972 113 ntBASIC5.87□□□□□ -1.47
CD44P16070 RNU1-146P-201ENST00000364015 165 ntBASIC5.87□□□□□ -1.47
CD44P16070 SNORA18.2-201ENST00000383865 132 ntBASIC5.87□□□□□ -1.47
CD44P16070 RNU6-622P-201ENST00000384272 103 ntBASIC5.87□□□□□ -1.47
CD44P16070 MIR589-201ENST00000385238 99 ntBASIC5.87□□□□□ -1.47
CD44P16070 RNA5SP201-201ENST00000410316 124 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms