Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 RPS29P28-201ENST00000446439 141 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 TEX21P-201ENST00000447107 1476 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.02□□□□□ -2.25
UBBP0CG47 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.02□□□□□ -2.25
UBBP0CG47 RPS29P29-201ENST00000456396 171 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AC112492.4-201ENST00000456549 352 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.02□□□□□ -2.25
UBBP0CG47 RPL39P36-201ENST00000490784 156 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 RNU6-548P-201ENST00000517083 115 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AC135279.1-201ENST00000543493 504 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.02□□□□□ -2.25
UBBP0CG47 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.02□□□□□ -2.25
UBBP0CG47 MIR4782-201ENST00000577987 79 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
UBBP0CG47 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.02□□□□□ -2.25
UBBP0CG47 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
UBBP0CG47 AC023043.2-201ENST00000589678 1026 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 BNIP3P27-201ENST00000599991 412 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AC087045.1-201ENST00000605856 382 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AC131235.4-201ENST00000609288 620 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AC090970.3-201ENST00000612566 866 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.02□□□□□ -2.25
UBBP0CG47 AC008121.3-201ENST00000618726 433 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AP000560.1-201ENST00000624150 1937 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AC017037.3-201ENST00000625016 472 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
UBBP0CG47 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 RNU6-1010P-201ENST00000362757 107 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 RNU5A-8P-201ENST00000364102 114 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 MIR597-201ENST00000384968 97 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 MIR29C-201ENST00000385231 88 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
UBBP0CG47 MIR1302-8-201ENST00000408342 128 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.01□□□□□ -2.25
UBBP0CG47 TXNL1P1-201ENST00000429528 554 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.01□□□□□ -2.25
UBBP0CG47 TOMM22P2-201ENST00000430735 237 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.01□□□□□ -2.25
UBBP0CG47 RPS25P9-201ENST00000435591 252 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 AL117351.1-201ENST00000438864 766 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.01□□□□□ -2.25
UBBP0CG47 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.01□□□□□ -2.25
UBBP0CG47 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 RPL30P11-203ENST00000598995 310 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 AC018926.1-201ENST00000616335 435 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 AC006386.1-201ENST00000619436 415 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.01□□□□□ -2.25
UBBP0CG47 AP000943.4-201ENST00000622912 357 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 AC091965.5-201ENST00000624785 342 ntBASIC1.01□□□□□ -2.25
UBBP0CG47 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
UBBP0CG47 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
UBBP0CG47 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
UBBP0CG47 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1□□□□□ -2.25
UBBP0CG47 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
UBBP0CG47 Y_RNA.40-201ENST00000362645 93 ntBASIC1□□□□□ -2.25
UBBP0CG47 RNU6-942P-201ENST00000363002 107 ntBASIC1□□□□□ -2.25
UBBP0CG47 Y_RNA.192-201ENST00000363977 102 ntBASIC1□□□□□ -2.25
UBBP0CG47 RNU4-91P-201ENST00000364778 135 ntBASIC1□□□□□ -2.25
UBBP0CG47 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1□□□□□ -2.25
UBBP0CG47 RNU6-1257P-201ENST00000384625 110 ntBASIC1□□□□□ -2.25
UBBP0CG47 MIR186-201ENST00000384988 86 ntBASIC1□□□□□ -2.25
UBBP0CG47 MIR618-201ENST00000385287 98 ntBASIC1□□□□□ -2.25
UBBP0CG47 RNU6-298P-201ENST00000390888 96 ntBASIC1□□□□□ -2.25
UBBP0CG47 MIR1289-2-201ENST00000408360 111 ntBASIC1□□□□□ -2.25
UBBP0CG47 RNA5SP501-201ENST00000410990 112 ntBASIC1□□□□□ -2.25
UBBP0CG47 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1□□□□□ -2.25
UBBP0CG47 AC092648.1-201ENST00000425870 423 ntBASIC1□□□□□ -2.25
UBBP0CG47 AL591704.1-201ENST00000432574 275 ntBASIC1□□□□□ -2.25
UBBP0CG47 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1□□□□□ -2.25
UBBP0CG47 PRELID3BP1-201ENST00000457142 540 ntBASIC1□□□□□ -2.25
UBBP0CG47 AL441985.1-201ENST00000457727 251 ntBASIC1□□□□□ -2.25
UBBP0CG47 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1□□□□□ -2.25
UBBP0CG47 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1□□□□□ -2.25
UBBP0CG47 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1□□□□□ -2.25
UBBP0CG47 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1□□□□□ -2.25
UBBP0CG47 RNU6-586P-201ENST00000517265 104 ntBASIC1□□□□□ -2.25
UBBP0CG47 AP003392.2-201ENST00000527269 208 ntBASIC1□□□□□ -2.25
UBBP0CG47 DEFB108A-201ENST00000530110 222 ntBASIC1□□□□□ -2.25
UBBP0CG47 AP000763.2-201ENST00000540641 163 ntBASIC1□□□□□ -2.25
UBBP0CG47 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1□□□□□ -2.25
UBBP0CG47 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1□□□□□ -2.25
UBBP0CG47 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1□□□□□ -2.25
UBBP0CG47 AC136618.2-201ENST00000575091 400 ntBASIC1□□□□□ -2.25
UBBP0CG47 MIR4421-201ENST00000578133 69 ntBASIC1□□□□□ -2.25
UBBP0CG47 AL158827.2-201ENST00000602494 330 ntBASIC1□□□□□ -2.25
UBBP0CG47 AL596327.1-201ENST00000603629 213 ntBASIC1□□□□□ -2.25
UBBP0CG47 AL021368.1-201ENST00000607490 540 ntBASIC1□□□□□ -2.25
UBBP0CG47 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1□□□□□ -2.25
UBBP0CG47 AL512598.1-201ENST00000610158 273 ntBASIC1□□□□□ -2.25
UBBP0CG47 AL355472.4-201ENST00000610233 626 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms