Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AC073063.1-201ENST00000434352 607 ntBASIC4.77□□□□□ -1.65
NEFMP07197 AC090774.1-201ENST00000435925 246 ntBASIC4.77□□□□□ -1.65
NEFMP07197 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.77□□□□□ -1.65
NEFMP07197 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.77□□□□□ -1.65
NEFMP07197 RPL23AP31-201ENST00000456160 467 ntBASIC4.77□□□□□ -1.65
NEFMP07197 RPL23AP14-201ENST00000468281 468 ntBASIC4.77□□□□□ -1.65
NEFMP07197 AC108860.1-201ENST00000484521 383 ntBASIC4.77□□□□□ -1.65
NEFMP07197 AC018437.1-201ENST00000492214 406 ntBASIC4.77□□□□□ -1.65
NEFMP07197 RNU7-4P-201ENST00000516961 62 ntBASIC4.77□□□□□ -1.65
NEFMP07197 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.77□□□□□ -1.65
NEFMP07197 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.77□□□□□ -1.65
NEFMP07197 AP000889.1-201ENST00000530968 660 ntBASIC4.77□□□□□ -1.65
NEFMP07197 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.77□□□□□ -1.65
NEFMP07197 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.77□□□□□ -1.65
NEFMP07197 MIR3186-201ENST00000577404 85 ntBASIC4.77□□□□□ -1.65
NEFMP07197 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NEFMP07197 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEFMP07197 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NEFMP07197 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NEFMP07197 AC007256.1-201ENST00000392253 2765 ntBASIC4.76□□□□□ -1.65
NEFMP07197 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NEFMP07197 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NEFMP07197 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NEFMP07197 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEFMP07197 RNU6-1303P-201ENST00000364841 107 ntBASIC4.76□□□□□ -1.65
NEFMP07197 MIR7-3-201ENST00000384898 110 ntBASIC4.76□□□□□ -1.65
NEFMP07197 RNU6-174P-201ENST00000410406 106 ntBASIC4.76□□□□□ -1.65
NEFMP07197 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.76□□□□□ -1.65
NEFMP07197 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.76□□□□□ -1.65
NEFMP07197 PPP1R11P2-201ENST00000423543 382 ntBASIC4.76□□□□□ -1.65
NEFMP07197 AL158071.1-201ENST00000430315 461 ntBASIC4.76□□□□□ -1.65
NEFMP07197 HMGB1P27-201ENST00000431429 603 ntBASIC4.76□□□□□ -1.65
NEFMP07197 HMGN2P31-201ENST00000432430 273 ntBASIC4.76□□□□□ -1.65
NEFMP07197 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NEFMP07197 NDUFB1P1-201ENST00000435191 180 ntBASIC4.76□□□□□ -1.65
NEFMP07197 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.76□□□□□ -1.65
NEFMP07197 SNORA31.3-201ENST00000516029 96 ntBASIC4.76□□□□□ -1.65
NEFMP07197 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.76□□□□□ -1.65
NEFMP07197 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.76□□□□□ -1.65
NEFMP07197 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.76□□□□□ -1.65
NEFMP07197 AC007375.1-201ENST00000554513 578 ntBASIC4.76□□□□□ -1.65
NEFMP07197 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.76□□□□□ -1.65
NEFMP07197 MIR5188-201ENST00000583467 113 ntBASIC4.76□□□□□ -1.65
NEFMP07197 RNU6-85P-201ENST00000605989 107 ntBASIC4.76□□□□□ -1.65
NEFMP07197 RMST_8.1-201ENST00000610287 165 ntBASIC4.76□□□□□ -1.65
NEFMP07197 AL591516.1-201ENST00000611326 274 ntBASIC4.76□□□□□ -1.65
NEFMP07197 AC010615.1-201ENST00000594254 1764 ntBASIC4.76□□□□□ -1.65
NEFMP07197 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEFMP07197 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEFMP07197 AC005183.1-201ENST00000603687 1979 ntBASIC4.75□□□□□ -1.65
NEFMP07197 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEFMP07197 OR56A5-201ENST00000340110 738 ntBASIC4.75□□□□□ -1.65
NEFMP07197 RNU6-288P-201ENST00000363690 104 ntBASIC4.75□□□□□ -1.65
NEFMP07197 RNU6-371P-201ENST00000364283 108 ntBASIC4.75□□□□□ -1.65
NEFMP07197 RNU4-42P-201ENST00000364738 142 ntBASIC4.75□□□□□ -1.65
NEFMP07197 Y_RNA.515-201ENST00000384535 112 ntBASIC4.75□□□□□ -1.65
NEFMP07197 MIR607-201ENST00000385241 96 ntBASIC4.75□□□□□ -1.65
NEFMP07197 MIR591-201ENST00000385290 95 ntBASIC4.75□□□□□ -1.65
NEFMP07197 RNU2-43P-201ENST00000410306 190 ntBASIC4.75□□□□□ -1.65
NEFMP07197 RNU6-1156P-201ENST00000410365 100 ntBASIC4.75□□□□□ -1.65
NEFMP07197 HMGB1P9-201ENST00000429856 646 ntBASIC4.75□□□□□ -1.65
NEFMP07197 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.75□□□□□ -1.65
NEFMP07197 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.75□□□□□ -1.65
NEFMP07197 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NEFMP07197 AL031274.1-201ENST00000450334 232 ntBASIC4.75□□□□□ -1.65
NEFMP07197 SNORD127-201ENST00000458892 86 ntBASIC4.75□□□□□ -1.65
NEFMP07197 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.75□□□□□ -1.65
NEFMP07197 RPL31P13-201ENST00000484151 370 ntBASIC4.75□□□□□ -1.65
NEFMP07197 AC022447.4-201ENST00000504053 364 ntBASIC4.75□□□□□ -1.65
NEFMP07197 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.75□□□□□ -1.65
NEFMP07197 AC110768.1-201ENST00000509222 400 ntBASIC4.75□□□□□ -1.65
NEFMP07197 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.75□□□□□ -1.65
NEFMP07197 AC104576.1-201ENST00000524225 88 ntBASIC4.75□□□□□ -1.65
NEFMP07197 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NEFMP07197 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.75□□□□□ -1.65
NEFMP07197 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.75□□□□□ -1.65
NEFMP07197 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.75□□□□□ -1.65
NEFMP07197 MTND4LP5-201ENST00000605152 292 ntBASIC4.75□□□□□ -1.65
NEFMP07197 AL160281.1-201ENST00000605307 311 ntBASIC4.75□□□□□ -1.65
NEFMP07197 MIR15A-201ENST00000607334 83 ntBASIC4.75□□□□□ -1.65
NEFMP07197 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEFMP07197 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEFMP07197 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEFMP07197 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
NEFMP07197 Y_RNA.551-201ENST00000384661 102 ntBASIC4.74□□□□□ -1.65
NEFMP07197 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEFMP07197 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.74□□□□□ -1.65
NEFMP07197 RPL21P90-201ENST00000415692 466 ntBASIC4.74□□□□□ -1.65
NEFMP07197 RPS15AP6-201ENST00000420703 385 ntBASIC4.74□□□□□ -1.65
NEFMP07197 BX276092.3-201ENST00000424182 230 ntBASIC4.74□□□□□ -1.65
NEFMP07197 AC006989.1-201ENST00000427212 131 ntBASIC4.74□□□□□ -1.65
NEFMP07197 CYCSP4-201ENST00000429682 331 ntBASIC4.74□□□□□ -1.65
NEFMP07197 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.74□□□□□ -1.65
NEFMP07197 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.74□□□□□ -1.65
NEFMP07197 HMGB3P8-201ENST00000449709 577 ntBASIC4.74□□□□□ -1.65
NEFMP07197 MTCO3P8-201ENST00000453691 755 ntBASIC4.74□□□□□ -1.65
NEFMP07197 RNU6-579P-201ENST00000516879 102 ntBASIC4.74□□□□□ -1.65
NEFMP07197 RNU6-840P-201ENST00000517275 65 ntBASIC4.74□□□□□ -1.65
NEFMP07197 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NEFMP07197 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms