Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AC007656.2-201ENST00000624902 4547 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 UBE2WP1-201ENST00000362030 340 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 RNU6-682P-201ENST00000363843 106 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.275-201ENST00000364726 110 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 RNU6-740P-201ENST00000364734 105 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.292-201ENST00000364904 97 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 RNU6-1145P-201ENST00000384246 107 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 Z98745.1-201ENST00000402553 494 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 RNU4-30P-201ENST00000410245 143 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 FAR2P2-201ENST00000413041 594 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 AL358075.3-201ENST00000426289 226 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 AC078809.1-201ENST00000427601 140 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 AL049745.1-201ENST00000433953 286 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 snoU13.20-201ENST00000459180 104 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 RNU6-567P-201ENST00000516746 107 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 RNU6-255P-201ENST00000516957 105 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 RNU6-58P-201ENST00000517143 103 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 CKS1BP7-201ENST00000522230 235 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 AC008033.2-201ENST00000542626 177 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 HSPE1P4-201ENST00000550617 308 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 MIR3934-201ENST00000579806 107 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 MIR4436B2-201ENST00000581415 91 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 MIR4436B1-201ENST00000583272 91 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 MIR4282-201ENST00000583613 67 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 AC072026.1-201ENST00000605023 201 ntBASIC3.82□□□□□ -1.8
SHISA3A0PJX4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SHISA3A0PJX4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 INTS6P1-201ENST00000504674 2530 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 AC092268.1-201ENST00000342691 405 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.82-201ENST00000363000 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.92-201ENST00000363043 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.122-201ENST00000363331 96 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 RNU6-1020P-201ENST00000363684 107 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 RNU6-884P-201ENST00000363889 107 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.235-201ENST00000364412 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.306-201ENST00000365015 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.312-201ENST00000365089 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.322-201ENST00000365151 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 MIR329-1-201ENST00000385028 80 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 SNORA46.1-201ENST00000391069 153 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 RNU6-1001P-201ENST00000411265 100 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 RPS26P42-201ENST00000413485 326 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 AL590762.4-201ENST00000425885 253 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 WARS2P1-201ENST00000429678 537 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.650-201ENST00000459002 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 RPL21P104-201ENST00000464143 478 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.777-201ENST00000516982 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 AC021231.3-201ENST00000558497 370 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 MIR3133-201ENST00000583157 78 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.771-201ENST00000598668 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.789-201ENST00000622480 102 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.81□□□□□ -1.8
SHISA3A0PJX4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.81□□□□□ -1.8
SHISA3A0PJX4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms