Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC006445.2-201ENST00000510061 472 ntBASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 AC069113.1-201ENST00000517763 267 ntBASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 AC138761.3-201ENST00000579993 334 ntBASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 AC008962.1-201ENST00000605729 304 ntBASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 U4.1-201ENST00000620349 87 ntBASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.72□□□□□ -1.81
LRFN3Q9BTN0 AP001148.1-201ENST00000624124 2359 ntBASIC3.71□□□□□ -1.81
LRFN3Q9BTN0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
LRFN3Q9BTN0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 MIR422A-201ENST00000362286 90 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 RNU6-1115P-201ENST00000362490 106 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.149-201ENST00000363558 117 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 RNU6-1040P-201ENST00000383974 107 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 RNU6-784P-201ENST00000384330 106 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.557-201ENST00000384680 107 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 RNA5SP219-201ENST00000390940 113 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 MIR888-201ENST00000401186 77 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC018865.2-201ENST00000423631 129 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC083863.1-201ENST00000438811 231 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 HMGB3P8-201ENST00000449709 577 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 RNU6-764P-201ENST00000516396 105 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 SNORA70.18-201ENST00000516696 98 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC073539.2-201ENST00000597113 165 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC012119.1-201ENST00000603184 222 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AL645944.1-201ENST00000603857 493 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC073657.2-201ENST00000605661 303 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC133104.2-201ENST00000615272 193 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC068831.7-201ENST00000616954 363 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AC006111.3-201ENST00000622137 383 ntBASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LRFN3Q9BTN0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.47-201ENST00000362697 108 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 SNORD116-11-201ENST00000383882 92 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AL360182.1-201ENST00000397433 468 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.618-201ENST00000410949 107 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 HMGB3P2-201ENST00000411913 584 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 RPLP0P7-201ENST00000416050 667 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AL353621.1-201ENST00000418219 243 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 HMGN2P30-201ENST00000423237 256 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 TOMM20P4-201ENST00000427861 435 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 RPL37P4-201ENST00000448908 268 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 SSXP4-201ENST00000451349 245 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 ANP32BP2-201ENST00000454525 545 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AC092798.1-201ENST00000458542 409 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 DYNLL1P5-201ENST00000467158 270 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AC093663.1-201ENST00000497190 394 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AC090115.3-201ENST00000553218 849 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 MTND6P33-201ENST00000571794 183 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AC093732.2-201ENST00000607950 274 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 MIR7154-201ENST00000620673 73 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 Z69720.2-201ENST00000624755 279 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 AL669831.3-213ENST00000636676 183 ntBASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRFN3Q9BTN0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms