Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.76□□□□□ -1.65
SIX5Q8N196 RNA5SP315-201ENST00000516340 116 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 RNA5SP312-201ENST00000517068 116 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 AC023632.4-201ENST00000517783 191 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 AK6P2-201ENST00000549020 471 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 AC027288.2-201ENST00000553028 243 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.76□□□□□ -1.65
SIX5Q8N196 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.76□□□□□ -1.65
SIX5Q8N196 AL591034.3-201ENST00000605511 685 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.76□□□□□ -1.65
SIX5Q8N196 AC006133.1-201ENST00000617106 264 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.76□□□□□ -1.65
SIX5Q8N196 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SIX5Q8N196 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SIX5Q8N196 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
SIX5Q8N196 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SIX5Q8N196 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.76□□□□□ -1.65
SIX5Q8N196 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SIX5Q8N196 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.75□□□□□ -1.65
SIX5Q8N196 AC021146.4-201ENST00000309229 279 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 Y_RNA.76-201ENST00000362931 109 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 RNU6-1280P-201ENST00000365211 107 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 RNU6-628P-201ENST00000410675 107 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 COX5BP7-201ENST00000414780 274 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX5Q8N196 AC074117.2-201ENST00000417130 397 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX5Q8N196 RPL7P49-201ENST00000471402 708 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 RPL23AP65-201ENST00000475608 468 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 Y_RNA.679-201ENST00000516416 91 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 SNORA67.7-201ENST00000516664 135 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 CR383656.8-201ENST00000549046 145 ntBASIC4.75□□□□□ -1.65
SIX5Q8N196 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SIX5Q8N196 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.75□□□□□ -1.65
SIX5Q8N196 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SIX5Q8N196 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.75□□□□□ -1.65
SIX5Q8N196 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SIX5Q8N196 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX5Q8N196 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX5Q8N196 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SIX5Q8N196 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
SIX5Q8N196 RNU6-137P-201ENST00000363680 108 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 Y_RNA.286-201ENST00000364813 102 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 SNORA62.3-201ENST00000365110 153 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 MIR659-201ENST00000384963 97 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 MIR10B-201ENST00000385011 110 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 PCNPP3-201ENST00000393579 471 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 Y_RNA.590-201ENST00000410140 107 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 RNU6-1001P-201ENST00000411265 100 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 FTH1P6-201ENST00000430768 320 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX5Q8N196 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX5Q8N196 RPL21P104-201ENST00000464143 478 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 MRPL42P6-201ENST00000486397 371 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 AC073073.1-201ENST00000493920 463 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.74□□□□□ -1.65
SIX5Q8N196 PARP4P3-201ENST00000510265 317 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 AC107393.1-201ENST00000512403 346 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 AP003730.1-201ENST00000524605 285 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 AC087441.2-201ENST00000529141 262 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 AC040958.1-201ENST00000561102 201 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 UBL5P4-201ENST00000562584 236 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 AC012468.1-201ENST00000604888 430 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 SNX18P1Y-201ENST00000616231 511 ntBASIC4.74□□□□□ -1.65
SIX5Q8N196 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX5Q8N196 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX5Q8N196 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SIX5Q8N196 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SIX5Q8N196 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SIX5Q8N196 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.74□□□□□ -1.65
SIX5Q8N196 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX5Q8N196 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX5Q8N196 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX5Q8N196 USP8P1-201ENST00000494673 3183 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SIX5Q8N196 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SIX5Q8N196 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SIX5Q8N196 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SIX5Q8N196 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.73□□□□□ -1.65
SIX5Q8N196 SPRR2C-201ENST00000290702 219 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 RNU5B-2P-201ENST00000363036 113 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 FTH1P15-201ENST00000406984 280 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX5Q8N196 CRYBB2P1-203ENST00000415709 538 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 AC007969.2-201ENST00000441891 191 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX5Q8N196 COX6CP14-201ENST00000469580 174 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX5Q8N196 MIR3158-1-201ENST00000583596 81 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 MIR3653-201ENST00000625572 110 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 SNORA43.4-201ENST00000629559 138 ntBASIC4.73□□□□□ -1.65
SIX5Q8N196 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.73□□□□□ -1.65
SIX5Q8N196 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX5Q8N196 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX5Q8N196 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX5Q8N196 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 RNU6-1020P-201ENST00000363684 107 ntBASIC4.72□□□□□ -1.65
SIX5Q8N196 RNU6-1141P-201ENST00000364520 107 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms