Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MIR3976-201ENST00000606807 139 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 SNORD39.4-201ENST00000620099 78 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 AC039056.2-201ENST00000622261 511 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 AP000553.6-201ENST00000641242 118 ntBASIC4.07□□□□□ -1.76
NCKAP1LP55160 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NCKAP1LP55160 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.07□□□□□ -1.76
NCKAP1LP55160 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NCKAP1LP55160 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.06□□□□□ -1.76
NCKAP1LP55160 RNU1-76P-201ENST00000362903 159 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 SNORA36C-201ENST00000384289 132 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 HSPE1P8-201ENST00000406997 288 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 RNU6ATAC-201ENST00000408749 126 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 RNU2-33P-201ENST00000410344 192 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AL096701.2-201ENST00000416920 238 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 HMGB1P27-201ENST00000431429 603 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AC092573.2-201ENST00000434546 243 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 NDUFB1P1-201ENST00000435191 180 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 RNU6-1037P-201ENST00000459571 107 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AC087588.1-201ENST00000462203 316 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 MED28P2-201ENST00000475771 317 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AC022493.1-201ENST00000492984 337 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 HMGN1P11-201ENST00000508668 303 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.06□□□□□ -1.76
NCKAP1LP55160 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.06□□□□□ -1.76
NCKAP1LP55160 RNU1-45P-201ENST00000517191 141 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.06□□□□□ -1.76
NCKAP1LP55160 AC126177.3-201ENST00000551839 688 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AC034105.4-201ENST00000568304 277 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AC005951.2-201ENST00000576282 495 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AC123912.5-201ENST00000605470 343 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 AC004792.1-201ENST00000614523 137 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.06□□□□□ -1.76
NCKAP1LP55160 AL353748.2-201ENST00000622148 471 ntBASIC4.06□□□□□ -1.76
NCKAP1LP55160 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NCKAP1LP55160 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NCKAP1LP55160 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 NCAPGP1-201ENST00000505112 1814 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 RNU6-1249P-201ENST00000363237 111 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 RNA5SP51-201ENST00000364750 119 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 RNU6-886P-201ENST00000384319 105 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 SNORA69.1-201ENST00000390904 137 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 RNU6-882P-201ENST00000391025 103 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 AP000275.1-201ENST00000411943 390 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 AC007098.1-201ENST00000420122 367 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 MYL8P-204ENST00000431574 518 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 AC104332.1-201ENST00000440471 797 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 RPL30P10-201ENST00000488148 337 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 AC020593.1-201ENST00000507399 299 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 AC008489.1-201ENST00000524271 483 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 AC074050.1-201ENST00000563247 211 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 AC010900.2-201ENST00000604508 210 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NCKAP1LP55160 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NCKAP1LP55160 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NCKAP1LP55160 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NCKAP1LP55160 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NCKAP1LP55160 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 AL136964.1-201ENST00000622038 2990 ntBASIC4.05□□□□□ -1.76
NCKAP1LP55160 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NCKAP1LP55160 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.05□□□□□ -1.76
NCKAP1LP55160 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.04□□□□□ -1.76
NCKAP1LP55160 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.04□□□□□ -1.76
NCKAP1LP55160 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCKAP1LP55160 Y_RNA.274-201ENST00000364714 101 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 SNORA70E-201ENST00000384492 135 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 SNORA19-201ENST00000384737 128 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 MIR554-201ENST00000384874 96 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 SNORD115-46-201ENST00000390982 71 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 PCNPP3-201ENST00000393579 471 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 RPL21P17-201ENST00000397467 475 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AL138878.1-201ENST00000405131 347 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 RNU4-78P-201ENST00000410940 126 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 RAB9AP3-201ENST00000412737 573 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AL139156.1-201ENST00000412785 841 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 RPS12P23-201ENST00000419579 400 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NCKAP1LP55160 SDAD1P3-201ENST00000427380 333 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AL590399.6-201ENST00000446396 307 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AL133547.1-201ENST00000448546 220 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 RAB9AP1-201ENST00000449393 573 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AL645939.1-201ENST00000453429 797 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NCKAP1LP55160 RN7SL93P-201ENST00000463035 293 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AC133134.1-201ENST00000466800 359 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AC098869.1-201ENST00000481627 292 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AC067942.3-201ENST00000512025 362 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.04□□□□□ -1.76
NCKAP1LP55160 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.04□□□□□ -1.76
NCKAP1LP55160 MIR1273C-201ENST00000578669 77 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AP000787.2-201ENST00000604432 568 ntBASIC4.04□□□□□ -1.76
NCKAP1LP55160 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.04□□□□□ -1.76
NCKAP1LP55160 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms