Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFX1P22670 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFX1P22670 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX1P22670 Y_RNA.84-201ENST00000363011 104 ntBASIC4.89□□□□□ -1.63
RFX1P22670 RNA5SP22-201ENST00000365393 109 ntBASIC4.89□□□□□ -1.63
RFX1P22670 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFX1P22670 RNU1-63P-201ENST00000383902 164 ntBASIC4.89□□□□□ -1.63
RFX1P22670 RNU1-44P-201ENST00000384453 163 ntBASIC4.89□□□□□ -1.63
RFX1P22670 SNORA37-201ENST00000384504 129 ntBASIC4.89□□□□□ -1.63
RFX1P22670 SNORD115-46-201ENST00000390982 71 ntBASIC4.89□□□□□ -1.63
RFX1P22670 RNU6-628P-201ENST00000410675 107 ntBASIC4.89□□□□□ -1.63
RFX1P22670 RNU6-1203P-201ENST00000410703 110 ntBASIC4.89□□□□□ -1.63
RFX1P22670 SNORA74C-2-201ENST00000411179 201 ntBASIC4.89□□□□□ -1.63
RFX1P22670 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.89□□□□□ -1.63
RFX1P22670 AC091286.1-201ENST00000431233 461 ntBASIC4.89□□□□□ -1.63
RFX1P22670 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.89□□□□□ -1.63
RFX1P22670 RPL30P1-201ENST00000488676 339 ntBASIC4.89□□□□□ -1.63
RFX1P22670 Y_RNA.673-201ENST00000516306 88 ntBASIC4.89□□□□□ -1.63
RFX1P22670 RN7SKP272-201ENST00000516988 232 ntBASIC4.89□□□□□ -1.63
RFX1P22670 SNORA31.23-201ENST00000517219 133 ntBASIC4.89□□□□□ -1.63
RFX1P22670 AP001781.1-201ENST00000530977 207 ntBASIC4.89□□□□□ -1.63
RFX1P22670 AC093023.1-201ENST00000547375 507 ntBASIC4.89□□□□□ -1.63
RFX1P22670 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.89□□□□□ -1.63
RFX1P22670 AC009163.5-201ENST00000575421 637 ntBASIC4.89□□□□□ -1.63
RFX1P22670 AC073410.2-201ENST00000603240 332 ntBASIC4.89□□□□□ -1.63
RFX1P22670 AC010201.1-201ENST00000605051 540 ntBASIC4.89□□□□□ -1.63
RFX1P22670 MIR6076-201ENST00000617521 113 ntBASIC4.89□□□□□ -1.63
RFX1P22670 MIR3529-201ENST00000637713 78 ntBASIC4.89□□□□□ -1.63
RFX1P22670 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX1P22670 AL672167.1-203ENST00000641299 2975 ntBASIC4.89□□□□□ -1.63
RFX1P22670 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX1P22670 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RFX1P22670 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX1P22670 AC083843.3-201ENST00000623679 2186 ntBASIC4.89□□□□□ -1.63
RFX1P22670 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX1P22670 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX1P22670 AC073073.2-201ENST00000609827 2578 ntBASIC4.89□□□□□ -1.63
RFX1P22670 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX1P22670 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RFX1P22670 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX1P22670 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.89□□□□□ -1.63
RFX1P22670 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RFX1P22670 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.88□□□□□ -1.63
RFX1P22670 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.88□□□□□ -1.63
RFX1P22670 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFX1P22670 SNORD56.1-201ENST00000362913 68 ntBASIC4.88□□□□□ -1.63
RFX1P22670 RNU6-137P-201ENST00000363680 108 ntBASIC4.88□□□□□ -1.63
RFX1P22670 RNA5SP28-201ENST00000363841 119 ntBASIC4.88□□□□□ -1.63
RFX1P22670 RNU6-487P-201ENST00000365430 104 ntBASIC4.88□□□□□ -1.63
RFX1P22670 RNU6-843P-201ENST00000384454 104 ntBASIC4.88□□□□□ -1.63
RFX1P22670 MIR153-2-201ENST00000385225 87 ntBASIC4.88□□□□□ -1.63
RFX1P22670 MIR134-201ENST00000385258 73 ntBASIC4.88□□□□□ -1.63
RFX1P22670 HDGFP1-201ENST00000405943 252 ntBASIC4.88□□□□□ -1.63
RFX1P22670 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.88□□□□□ -1.63
RFX1P22670 AC096920.1-201ENST00000423991 241 ntBASIC4.88□□□□□ -1.63
RFX1P22670 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFX1P22670 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFX1P22670 RPL32P34-201ENST00000486380 400 ntBASIC4.88□□□□□ -1.63
RFX1P22670 RNA5SP497-201ENST00000516081 97 ntBASIC4.88□□□□□ -1.63
RFX1P22670 RNU6-1012P-201ENST00000516606 109 ntBASIC4.88□□□□□ -1.63
RFX1P22670 IGKV2-23-201ENST00000518729 323 ntBASIC4.88□□□□□ -1.63
RFX1P22670 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFX1P22670 AC007375.1-201ENST00000554513 578 ntBASIC4.88□□□□□ -1.63
RFX1P22670 MTND6P33-201ENST00000571794 183 ntBASIC4.88□□□□□ -1.63
RFX1P22670 AP001282.2-201ENST00000616149 309 ntBASIC4.88□□□□□ -1.63
RFX1P22670 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.88□□□□□ -1.63
RFX1P22670 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.88□□□□□ -1.63
RFX1P22670 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX1P22670 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX1P22670 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.88□□□□□ -1.63
RFX1P22670 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFX1P22670 OR14L1P-202ENST00000641545 3009 ntBASIC4.88□□□□□ -1.63
RFX1P22670 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX1P22670 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFX1P22670 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX1P22670 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RFX1P22670 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
RFX1P22670 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX1P22670 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
RFX1P22670 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RFX1P22670 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX1P22670 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX1P22670 AC021146.4-201ENST00000309229 279 ntBASIC4.87□□□□□ -1.63
RFX1P22670 RNA5SP307-201ENST00000362863 116 ntBASIC4.87□□□□□ -1.63
RFX1P22670 RNU5B-2P-201ENST00000363036 113 ntBASIC4.87□□□□□ -1.63
RFX1P22670 RNU6-1141P-201ENST00000364520 107 ntBASIC4.87□□□□□ -1.63
RFX1P22670 SNORA29-201ENST00000384183 140 ntBASIC4.87□□□□□ -1.63
RFX1P22670 MIR215-201ENST00000384858 110 ntBASIC4.87□□□□□ -1.63
RFX1P22670 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.87□□□□□ -1.63
RFX1P22670 MTHFD2P2-201ENST00000407725 247 ntBASIC4.87□□□□□ -1.63
RFX1P22670 RNA5SP390-201ENST00000410191 113 ntBASIC4.87□□□□□ -1.63
RFX1P22670 RN7SKP61-201ENST00000410642 295 ntBASIC4.87□□□□□ -1.63
RFX1P22670 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX1P22670 RAC1P3-201ENST00000416129 580 ntBASIC4.87□□□□□ -1.63
RFX1P22670 RPL7AP25-201ENST00000423357 805 ntBASIC4.87□□□□□ -1.63
RFX1P22670 AC078809.1-201ENST00000427601 140 ntBASIC4.87□□□□□ -1.63
RFX1P22670 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX1P22670 AL590664.1-201ENST00000448065 339 ntBASIC4.87□□□□□ -1.63
RFX1P22670 NUTF2P3-201ENST00000448540 384 ntBASIC4.87□□□□□ -1.63
RFX1P22670 SNORA84-201ENST00000459229 133 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms