Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.54□□□□□ -2
CEACAM4O75871 AL157687.1-201ENST00000554853 619 ntBASIC2.54□□□□□ -2
CEACAM4O75871 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.54□□□□□ -2
CEACAM4O75871 MIR1273C-201ENST00000578669 77 ntBASIC2.54□□□□□ -2
CEACAM4O75871 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.54□□□□□ -2
CEACAM4O75871 MIR548AC-201ENST00000585049 88 ntBASIC2.54□□□□□ -2
CEACAM4O75871 AC104984.5-201ENST00000586878 94 ntBASIC2.54□□□□□ -2
CEACAM4O75871 AC020895.1-201ENST00000595362 272 ntBASIC2.54□□□□□ -2
CEACAM4O75871 BNIP3P30-201ENST00000601184 574 ntBASIC2.54□□□□□ -2
CEACAM4O75871 DUSP12P1-201ENST00000612874 516 ntBASIC2.54□□□□□ -2
CEACAM4O75871 MIR3688-2-201ENST00000636963 87 ntBASIC2.54□□□□□ -2
CEACAM4O75871 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.54□□□□□ -2
CEACAM4O75871 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.54□□□□□ -2
CEACAM4O75871 AC004972.1-201ENST00000623934 2209 ntBASIC2.53□□□□□ -2
CEACAM4O75871 MIR148B-201ENST00000362252 99 ntBASIC2.53□□□□□ -2
CEACAM4O75871 RNY4P14-201ENST00000363656 96 ntBASIC2.53□□□□□ -2
CEACAM4O75871 Y_RNA.256-201ENST00000364594 104 ntBASIC2.53□□□□□ -2
CEACAM4O75871 Y_RNA.295-201ENST00000364918 102 ntBASIC2.53□□□□□ -2
CEACAM4O75871 RNU6-715P-201ENST00000365204 103 ntBASIC2.53□□□□□ -2
CEACAM4O75871 XGY1-201ENST00000381172 446 ntBASIC2.53□□□□□ -2
CEACAM4O75871 RNU6-1179P-201ENST00000384667 107 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.53□□□□□ -2
CEACAM4O75871 CIR1P3-201ENST00000405137 479 ntBASIC2.53□□□□□ -2
CEACAM4O75871 RPS4XP7-201ENST00000406274 780 ntBASIC2.53□□□□□ -2
CEACAM4O75871 RNA5SP508-201ENST00000411327 119 ntBASIC2.53□□□□□ -2
CEACAM4O75871 EEF1A1P40-201ENST00000412883 573 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.53□□□□□ -2
CEACAM4O75871 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.53□□□□□ -2
CEACAM4O75871 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.53□□□□□ -2
CEACAM4O75871 MTCYBP5-201ENST00000423752 1135 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.53□□□□□ -2
CEACAM4O75871 USP9YP28-201ENST00000435142 589 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.53□□□□□ -2
CEACAM4O75871 AL513043.1-201ENST00000439124 535 ntBASIC2.53□□□□□ -2
CEACAM4O75871 UBBP3-201ENST00000445497 241 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.53□□□□□ -2
CEACAM4O75871 RPL21P41-201ENST00000459863 264 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.53□□□□□ -2
CEACAM4O75871 MTCO3P9-201ENST00000506989 781 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.53□□□□□ -2
CEACAM4O75871 AC096725.1-201ENST00000514266 313 ntBASIC2.53□□□□□ -2
CEACAM4O75871 RNU6-1038P-201ENST00000516516 104 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.53□□□□□ -2
CEACAM4O75871 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.53□□□□□ -2
CEACAM4O75871 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.53□□□□□ -2
CEACAM4O75871 AC234778.2-201ENST00000566241 354 ntBASIC2.53□□□□□ -2
CEACAM4O75871 HMGN2P15-201ENST00000585707 270 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AP000907.4-201ENST00000604143 237 ntBASIC2.53□□□□□ -2
CEACAM4O75871 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.53□□□□□ -2
CEACAM4O75871 AP001486.3-201ENST00000615334 372 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AL161629.2-201ENST00000615347 275 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AC007014.2-201ENST00000615581 479 ntBASIC2.53□□□□□ -2
CEACAM4O75871 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AL590808.1-201ENST00000618696 141 ntBASIC2.53□□□□□ -2
CEACAM4O75871 uc_338.11-201ENST00000619132 160 ntBASIC2.53□□□□□ -2
CEACAM4O75871 AC092608.2-201ENST00000624427 218 ntBASIC2.53□□□□□ -2
CEACAM4O75871 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.53□□□□□ -2
CEACAM4O75871 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CEACAM4O75871 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.53□□□□□ -2
CEACAM4O75871 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CEACAM4O75871 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CEACAM4O75871 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CEACAM4O75871 AC022336.2-201ENST00000568966 2538 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
CEACAM4O75871 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.52□□□□□ -2.01
CEACAM4O75871 AC009487.2-201ENST00000420969 6821 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 RNU1-35P-201ENST00000362782 153 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 RNU4-66P-201ENST00000365199 138 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CEACAM4O75871 RNU6-877P-201ENST00000383868 107 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 MIR512-1-201ENST00000384913 84 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 SNORD70.1-201ENST00000391007 85 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 AL356057.2-201ENST00000403318 432 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 AC245054.2-201ENST00000415639 319 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 AL353729.1-201ENST00000425044 720 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 SKA2P1-201ENST00000425592 390 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 AC093151.1-201ENST00000427711 313 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 MYL8P-204ENST00000431574 518 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 SCARNA18-201ENST00000459004 134 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.52□□□□□ -2.01
CEACAM4O75871 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.52□□□□□ -2.01
CEACAM4O75871 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CEACAM4O75871 RN7SKP43-201ENST00000516173 320 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 RNU6-572P-201ENST00000516724 80 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 SNORA31.19-201ENST00000517079 126 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 SNORA31.21-201ENST00000517180 77 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 AC009902.1-201ENST00000519351 183 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 SUB1P1-201ENST00000524415 382 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 HPRT1P3-201ENST00000539521 576 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 AP002770.2-201ENST00000543613 532 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.52□□□□□ -2.01
CEACAM4O75871 AL391261.3-201ENST00000557194 520 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 RPL23AP88-201ENST00000605759 454 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 AC090115.4-201ENST00000609970 188 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 uc_338.34-201ENST00000617467 174 ntBASIC2.52□□□□□ -2.01
CEACAM4O75871 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.52□□□□□ -2.01
CEACAM4O75871 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.52□□□□□ -2.01
CEACAM4O75871 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.52□□□□□ -2.01
CEACAM4O75871 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms