Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNU6-1088P-201ENST00000516850 104 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 CASP1P1-201ENST00000526345 212 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AP000763.2-201ENST00000540641 163 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 MIR3942-201ENST00000585264 109 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AC012493.2-201ENST00000595083 291 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AC012119.1-201ENST00000603184 222 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 CTHRC1P1-201ENST00000605383 469 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 uc_338.15-201ENST00000615470 191 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AC027309.3-201ENST00000623419 351 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AC022336.2-201ENST00000568966 2538 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AL079305.1-201ENST00000623159 3008 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.148-201ENST00000363557 117 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 SNORD113-7-201ENST00000363762 77 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.187-201ENST00000363918 113 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 MTCYBP4-201ENST00000401524 249 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 RPS4XP7-201ENST00000406274 780 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 RPL21P109-201ENST00000422213 475 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AL360271.2-201ENST00000447710 161 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.635-201ENST00000459041 101 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 RN7SL93P-201ENST00000463035 293 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC093663.1-201ENST00000497190 394 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC008716.1-201ENST00000511084 513 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC093303.1-201ENST00000514549 295 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 SMURF2P1-201ENST00000514992 481 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 RN7SKP209-201ENST00000516888 304 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC090136.1-201ENST00000520009 240 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 CYP2C61P-201ENST00000604072 290 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 SNORD39.4-201ENST00000620099 78 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC006111.3-201ENST00000622137 383 ntBASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC187A0A096LP49 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.480-201ENST00000384364 102 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 RN7SKP158-201ENST00000410453 326 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 RNU6-1077P-201ENST00000410506 102 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 RNU6-1025P-201ENST00000410629 104 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 RPL23AP69-201ENST00000431134 458 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 HMGB3P11-201ENST00000440127 604 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 ELOCP24-201ENST00000456370 334 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 TRBVA-201ENST00000498804 316 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 SNORA14.1-201ENST00000516113 141 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 RNA5SP165-201ENST00000517142 115 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 MIR4680-201ENST00000580906 66 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 AC073539.2-201ENST00000597113 165 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 ATP1B3P1-201ENST00000605365 821 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 DUSP12P1-201ENST00000612874 516 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 MIR7112-201ENST00000616126 65 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 MTND4P1-201ENST00000457501 1466 ntBASIC3.35□□□□□ -1.87
CCDC187A0A096LP49 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 RNU6-1013P-201ENST00000384180 107 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 RNU6-140P-201ENST00000384566 108 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 SNORA48.5-201ENST00000391143 135 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms