Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 LCOR-201ENST00000286067 4542 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 RNU1-33P-201ENST00000364249 162 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 RNA5SP433-201ENST00000364491 114 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 RNU6-520P-201ENST00000384717 104 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 MIR654-201ENST00000385199 81 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 RNA5SP299-201ENST00000391203 116 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 AC244098.3-201ENST00000424803 96 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 FUNDC2P2-202ENST00000443452 493 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 DBIL5P-202ENST00000453414 250 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 RPL10P6-201ENST00000457497 318 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 RNU7-106P-201ENST00000459514 67 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SL395P-201ENST00000462960 291 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 AC023632.4-201ENST00000517783 191 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 MIR6761-201ENST00000617899 72 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 U4.3-201ENST00000621047 82 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 FLII-230ENST00000628188 156 ntTSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 AC144833.1-201ENST00000567953 4089 ntBASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC3.57□□□□□ -1.84
KRTAP3-3Q9BYR6 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 RNA5SP71-201ENST00000362967 126 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 RNA5SP189-201ENST00000364920 115 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 RNA5SP79-201ENST00000365193 109 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 MRPS21P1-201ENST00000453850 223 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 RPS16P9-201ENST00000477220 427 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SL705P-201ENST00000481678 294 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 RPS23P1-201ENST00000491662 432 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SKP233-201ENST00000517005 110 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 AC144548.1-201ENST00000549577 324 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 AC096996.1-201ENST00000563813 325 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 AC015801.1-201ENST00000585651 153 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms