Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 Y_RNA.587-201ENST00000391210 103 ntBASIC5.43□□□□□ -1.54
PTCD2Q8WV60 AC004386.2-201ENST00000441858 148 ntBASIC5.43□□□□□ -1.54
PTCD2Q8WV60 RNU6-197P-201ENST00000516680 100 ntBASIC5.43□□□□□ -1.54
PTCD2Q8WV60 AC126177.5-201ENST00000549599 178 ntBASIC5.43□□□□□ -1.54
PTCD2Q8WV60 MIR3136-201ENST00000583498 78 ntBASIC5.43□□□□□ -1.54
PTCD2Q8WV60 U6.115-201ENST00000636045 103 ntBASIC5.43□□□□□ -1.54
PTCD2Q8WV60 AC068205.3-201ENST00000636385 468 ntBASIC5.43□□□□□ -1.54
PTCD2Q8WV60 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCD2Q8WV60 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD2Q8WV60 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCD2Q8WV60 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCD2Q8WV60 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
PTCD2Q8WV60 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD2Q8WV60 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
PTCD2Q8WV60 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 MIR133B-201ENST00000362210 119 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 RNU6-49P-201ENST00000384256 107 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 AC244098.2-201ENST00000422068 99 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 SRSF1P1-201ENST00000424058 520 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 NDUFS5P3-201ENST00000450668 321 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 RN7SL515P-201ENST00000463999 297 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 ENPP7P11-201ENST00000505915 627 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 BX510359.5-201ENST00000515651 304 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 RN7SKP276-201ENST00000516242 268 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 RNU6-344P-201ENST00000516635 111 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 AC006065.5-201ENST00000623427 349 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 MIR1245B-201ENST00000636115 69 ntBASIC5.42□□□□□ -1.54
PTCD2Q8WV60 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCD2Q8WV60 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 RNA5SP183-201ENST00000362452 119 ntBASIC5.41□□□□□ -1.54
PTCD2Q8WV60 U3.2-201ENST00000362981 210 ntBASIC5.41□□□□□ -1.54
PTCD2Q8WV60 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 MIRLET7F2-201ENST00000385277 83 ntBASIC5.41□□□□□ -1.54
PTCD2Q8WV60 CBX3P9-201ENST00000402326 552 ntBASIC5.41□□□□□ -1.54
PTCD2Q8WV60 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.41□□□□□ -1.54
PTCD2Q8WV60 BX510359.2-201ENST00000417920 305 ntBASIC5.41□□□□□ -1.54
PTCD2Q8WV60 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 snoU13.4-201ENST00000458916 104 ntBASIC5.41□□□□□ -1.54
PTCD2Q8WV60 SNORA31.8-201ENST00000516327 108 ntBASIC5.41□□□□□ -1.54
PTCD2Q8WV60 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 AC090897.2-201ENST00000581715 130 ntBASIC5.41□□□□□ -1.54
PTCD2Q8WV60 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD2Q8WV60 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 AC005332.5-201ENST00000591222 2919 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 RNU6-978P-201ENST00000364371 103 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 Y_RNA.281-201ENST00000364774 94 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 RNA5SP487-201ENST00000410186 122 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 RPS3AP1-201ENST00000413190 320 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 SNORA40.13-201ENST00000516379 120 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 RNU7-115P-201ENST00000516433 55 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 RNA5SP34-201ENST00000516887 130 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.4□□□□□ -1.54
PTCD2Q8WV60 AC040958.1-201ENST00000561102 201 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 MIR6839-201ENST00000620425 113 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 AC018692.3-201ENST00000623929 123 ntBASIC5.4□□□□□ -1.54
PTCD2Q8WV60 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.4□□□□□ -1.55
PTCD2Q8WV60 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTCD2Q8WV60 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTCD2Q8WV60 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PTCD2Q8WV60 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.4□□□□□ -1.55
PTCD2Q8WV60 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.4□□□□□ -1.55
PTCD2Q8WV60 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PTCD2Q8WV60 C4BPAP1-201ENST00000415474 1893 ntBASIC5.39□□□□□ -1.55
PTCD2Q8WV60 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.39□□□□□ -1.55
PTCD2Q8WV60 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PTCD2Q8WV60 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC5.39□□□□□ -1.55
PTCD2Q8WV60 ZNF137P-201ENST00000456718 1920 ntBASIC5.39□□□□□ -1.55
PTCD2Q8WV60 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCD2Q8WV60 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTCD2Q8WV60 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms