Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.79□□□□□ -1.64
SIX5Q8N196 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIX5Q8N196 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.79□□□□□ -1.64
SIX5Q8N196 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.79□□□□□ -1.64
SIX5Q8N196 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIX5Q8N196 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SIX5Q8N196 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIX5Q8N196 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.78□□□□□ -1.64
SIX5Q8N196 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SIX5Q8N196 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SIX5Q8N196 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SIX5Q8N196 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.78□□□□□ -1.64
SIX5Q8N196 SNORA25.1-201ENST00000362326 128 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 RNU6-884P-201ENST00000363889 107 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 RN7SKP280-201ENST00000364196 304 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 RNU6-662P-201ENST00000384253 104 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 Y_RNA.464-201ENST00000384282 110 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 SNORA19-201ENST00000384737 128 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 Z98745.1-201ENST00000402553 494 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 U3.32-201ENST00000408116 212 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 RNU4-30P-201ENST00000410245 143 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 RNA5SP129-201ENST00000410276 118 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 GPM6BP3-201ENST00000442797 145 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 AC096638.1-201ENST00000444678 216 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 SSXP4-201ENST00000451349 245 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 RNU7-120P-201ENST00000459334 63 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 snoU13.22-201ENST00000459428 104 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 AP000873.1-201ENST00000463987 400 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 RPL36AP41-201ENST00000493820 306 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 RN7SKP49-201ENST00000516675 260 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.78□□□□□ -1.64
SIX5Q8N196 RN7SL176P-201ENST00000580352 264 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 MIR6134-201ENST00000617606 109 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.78□□□□□ -1.64
SIX5Q8N196 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SIX5Q8N196 AL079305.1-201ENST00000623159 3008 ntBASIC4.78□□□□□ -1.64
SIX5Q8N196 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SIX5Q8N196 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SIX5Q8N196 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SIX5Q8N196 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SIX5Q8N196 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX5Q8N196 SALL4P2-201ENST00000423288 2910 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SIX5Q8N196 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX5Q8N196 RNU1-100P-201ENST00000365255 165 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 RNA5SP167-201ENST00000365461 116 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SIX5Q8N196 Y_RNA.569-201ENST00000384749 103 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 MIR670-201ENST00000390142 98 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 MIR888-201ENST00000401186 77 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX5Q8N196 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.77□□□□□ -1.65
SIX5Q8N196 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX5Q8N196 UQCRHP4-201ENST00000471686 272 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 AC020890.1-201ENST00000491837 504 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 AC016632.1-201ENST00000503994 196 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX5Q8N196 RNU6-1198P-201ENST00000516904 67 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 Y_RNA.719-201ENST00000517156 106 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 RNU6-709P-201ENST00000517257 104 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.77□□□□□ -1.65
SIX5Q8N196 CBX3P4-201ENST00000538909 354 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 HSPE1P4-201ENST00000550617 308 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 AC093249.4-201ENST00000564755 259 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX5Q8N196 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX5Q8N196 AC006130.2-201ENST00000586202 326 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 AL162424.1-201ENST00000602325 221 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 Z83818.1-201ENST00000603584 150 ntBASIC4.77□□□□□ -1.65
SIX5Q8N196 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.77□□□□□ -1.65
SIX5Q8N196 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SIX5Q8N196 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX5Q8N196 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX5Q8N196 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.77□□□□□ -1.65
SIX5Q8N196 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX5Q8N196 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX5Q8N196 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
SIX5Q8N196 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SIX5Q8N196 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.76□□□□□ -1.65
SIX5Q8N196 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SIX5Q8N196 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.76□□□□□ -1.65
SIX5Q8N196 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SIX5Q8N196 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SIX5Q8N196 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SIX5Q8N196 AL157777.2-201ENST00000258070 137 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 RNU6-1159P-201ENST00000362933 107 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 SNORD32A-201ENST00000364805 84 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 RNU1-13P-201ENST00000384499 162 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 MIR544A-201ENST00000384855 91 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 RNA5SP317-201ENST00000410176 116 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 RNA5SP311-201ENST00000411290 116 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 RPL23AP26-201ENST00000412728 464 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 NDUFS5P4-201ENST00000412983 318 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 AL390729.2-201ENST00000416137 156 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 RPL23AP95-201ENST00000426806 265 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 WARS2P1-201ENST00000429678 537 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 AC073901.1-201ENST00000462471 408 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 AC117440.1-201ENST00000474107 571 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 AC097462.2-201ENST00000504623 481 ntBASIC4.76□□□□□ -1.65
SIX5Q8N196 AC005921.1-201ENST00000510589 286 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms