Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AC099654.7-201ENST00000635788 2127 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 SNORD114-19-201ENST00000363072 75 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-1048P-201ENST00000364054 107 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 RNA5SP505-201ENST00000364748 108 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 SNORD32A-201ENST00000364805 84 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 MIR192-201ENST00000384915 110 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 RNU4-43P-201ENST00000410628 137 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AC008065.1-201ENST00000428525 348 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AL135790.2-201ENST00000437701 267 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AC243964.1-201ENST00000441814 261 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AC009220.1-201ENST00000451614 275 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AC006026.2-201ENST00000457376 180 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 RPL23AP56-201ENST00000460778 453 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AC006463.2-201ENST00000473326 348 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 RN7SL459P-201ENST00000481078 302 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 RPS4XP13-201ENST00000483219 789 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 NIP7P2-201ENST00000485801 544 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AC098976.1-201ENST00000513014 541 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-572P-201ENST00000516724 80 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 MIR6810-201ENST00000622701 70 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AP000346.3-201ENST00000622821 210 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 MIR1245B-201ENST00000636115 69 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 MIR3674-201ENST00000636576 68 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AL596211.1-201ENST00000569873 2277 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 Y_RNA.179-201ENST00000363844 90 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 SNORD58C-201ENST00000365223 64 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-356P-201ENST00000384140 107 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 SNORA72.4-201ENST00000384174 132 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-106P-201ENST00000384405 107 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 MIR141-201ENST00000384975 95 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 SNORA48.4-201ENST00000391089 134 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 U3.40-201ENST00000408706 208 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 RPL17P36-201ENST00000420302 549 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 ANP32BP2-201ENST00000454525 545 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 snoU13.3-201ENST00000459441 104 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 RPS20P22-201ENST00000473700 357 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-561P-201ENST00000516222 102 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 SNORA43.2-201ENST00000516652 128 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 AC091042.1-201ENST00000579213 173 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 AL391358.1-201ENST00000605342 190 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 MIR6780A-201ENST00000615089 68 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 AC012640.5-201ENST00000623897 319 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
RNFT1Q5M7Z0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 Y_RNA.245-201ENST00000364493 95 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 RNA5SP173-201ENST00000364857 136 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 SNORA20B-201ENST00000384220 132 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AL606845.1-201ENST00000404881 255 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-1245P-201ENST00000411130 106 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 RN7SKP53-201ENST00000411337 315 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 RPL26P27-201ENST00000414397 437 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AC096649.2-201ENST00000416186 393 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AC245028.1-201ENST00000423259 256 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AC006028.1-201ENST00000438379 402 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AC073264.2-201ENST00000448886 166 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AC146507.2-201ENST00000460608 476 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 RNU2-12P-201ENST00000517216 168 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 RPL23AP53-201ENST00000521854 457 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms