Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL121601.2-201ENST00000438019 707 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 CR769776.1-201ENST00000441254 787 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 MTND5P14-201ENST00000441481 1267 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.13□□□□□ -2.23
HIST1H3AP68431 MTND2P3-201ENST00000452458 470 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 AC104563.1-201ENST00000476147 376 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 AC132942.1-201ENST00000486753 483 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 PTP4A1P4-201ENST00000512479 322 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.13□□□□□ -2.23
HIST1H3AP68431 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.13□□□□□ -2.23
HIST1H3AP68431 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.13□□□□□ -2.23
HIST1H3AP68431 AC073410.2-201ENST00000603240 332 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 AL391813.2-201ENST00000609113 322 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 MIR8074-201ENST00000615081 81 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 AC006338.1-201ENST00000618453 749 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 AC231657.1-201ENST00000624313 397 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 AL079343.1-201ENST00000572358 1771 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.13□□□□□ -2.23
HIST1H3AP68431 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
HIST1H3AP68431 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.13□□□□□ -2.23
HIST1H3AP68431 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HIST1H3AP68431 RNU6-188P-201ENST00000364207 107 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 RNU6-1164P-201ENST00000364428 107 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 SNORD26-201ENST00000384147 75 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 RNU6-611P-201ENST00000384276 104 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 SNORA40.6-201ENST00000391153 128 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 AL590084.1-201ENST00000407885 387 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H3AP68431 AC092634.2-201ENST00000428146 1010 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 AP000949.1-201ENST00000438328 629 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 BRK1P2-201ENST00000442875 223 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 RPL18AP17-201ENST00000455326 198 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 BTF3P15-201ENST00000455606 336 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 RPL7P43-201ENST00000478876 753 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H3AP68431 AC108210.2-201ENST00000503681 201 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.12□□□□□ -2.23
HIST1H3AP68431 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 MIR4421-201ENST00000578133 69 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 MIR4422-201ENST00000581938 83 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.12□□□□□ -2.23
HIST1H3AP68431 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H3AP68431 AC098483.2-201ENST00000603158 454 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 AL512598.1-201ENST00000610158 273 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H3AP68431 AC099654.9-201ENST00000637055 678 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 AC092447.10-201ENST00000620607 1652 ntBASIC1.12□□□□□ -2.23
HIST1H3AP68431 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.12□□□□□ -2.23
HIST1H3AP68431 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
HIST1H3AP68431 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HIST1H3AP68431 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HIST1H3AP68431 RNU6-288P-201ENST00000363690 104 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 RNU6-546P-201ENST00000383991 107 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 RNU6-207P-201ENST00000384137 107 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 AL079342.2-201ENST00000403367 482 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 USP9YP35-201ENST00000435696 412 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 snoU13.9-201ENST00000458927 103 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 RN7SKP210-201ENST00000459176 261 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 RNU7-95P-201ENST00000459222 64 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 AC104629.1-201ENST00000494226 508 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 RNU2-53P-201ENST00000516257 147 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 RNU6-1225P-201ENST00000516336 65 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 RPS3AP4-201ENST00000555161 764 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.11□□□□□ -2.23
HIST1H3AP68431 AC136619.2-201ENST00000563361 631 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.11□□□□□ -2.23
HIST1H3AP68431 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.11□□□□□ -2.23
HIST1H3AP68431 AC010900.2-201ENST00000604508 210 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 AC025754.2-201ENST00000606491 432 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 AC021755.4-201ENST00000616620 456 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 AC097655.1-201ENST00000635075 318 ntBASIC1.11□□□□□ -2.23
HIST1H3AP68431 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.11□□□□□ -2.23
HIST1H3AP68431 ZNF29P-201ENST00000225587 168 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 RNU6-744P-201ENST00000365557 107 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 RNU6-1316P-201ENST00000384242 108 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 AC068533.2-201ENST00000411872 306 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 HMGB1P31-201ENST00000437242 427 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 ELOCP30-201ENST00000447108 299 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 AC112492.4-201ENST00000456549 352 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 AC108729.1-201ENST00000487812 947 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 MTCYBP16-201ENST00000509187 1129 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 RNU6-150P-201ENST00000516237 95 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.1□□□□□ -2.23
HIST1H3AP68431 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.1□□□□□ -2.23
HIST1H3AP68431 AC084364.2-201ENST00000546924 395 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.1□□□□□ -2.23
HIST1H3AP68431 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.1□□□□□ -2.23
HIST1H3AP68431 BNIP3P27-201ENST00000599991 412 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 AC093788.1-201ENST00000609356 927 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 Z82243.1-201ENST00000609432 473 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 AL353997.5-201ENST00000618886 171 ntBASIC1.1□□□□□ -2.23
HIST1H3AP68431 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HIST1H3AP68431 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.1□□□□□ -2.23
HIST1H3AP68431 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HIST1H3AP68431 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
HIST1H3AP68431 RNU6-468P-201ENST00000384003 109 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 RNU6-1274P-201ENST00000384557 107 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 RNU1-78P-201ENST00000391248 165 ntBASIC1.09□□□□□ -2.23
HIST1H3AP68431 RNA5SP100-201ENST00000410903 110 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms